Planktomarina temperata: RCA23_c19600
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Entry
RCA23_c19600 CDS
T03229
Symbol
soxA4
Name
(GenBank) sarcosine oxidase alpha subunit SoxA
KO
K22086
methylglutamate dehydrogenase subunit C [EC:
1.5.99.5
]
Organism
ptp
Planktomarina temperata
Pathway
ptp00680
Methane metabolism
ptp01100
Metabolic pathways
ptp01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
ptp00001
]
09100 Metabolism
09102 Energy metabolism
00680 Methane metabolism
RCA23_c19600 (soxA4)
Enzymes [BR:
ptp01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.99 With unknown physiological acceptors
1.5.99.5 methylglutamate dehydrogenase
RCA23_c19600 (soxA4)
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GFIT
Motif
Pfam:
GCV_T
SO_alpha_A3
Fer2_4
GCV_T_C
FAD_oxidored
NAD_binding_8
FAD_binding_2
Pyr_redox_2
HI0933_like
GIDA
AlaDh_PNT_C
Thi4
FAD_binding_3
Pyr_redox_3
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
AII87491
UniProt:
A0AAN0VIU1
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All DBs
Position
2100906..2103860
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AA seq
984 aa
AA seq
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MSQINRLPGGQIDRSQSLDFTFDGKAYQGHAGDTLASALLANGVRLMGRSFKYHRPRGVL
TAGSEEPNALVELREGARKEPNTRATTAELFGGLSANSQNKIGSLRFDLMAINDRFANFL
TAGFYYKTFMWPATFWEKLYEPIIRKAAGLGSISLQEDPDAYDRGFLHCDLLIIGAGPAG
LAAALTAGRAGAQVILADEDFTLGGRLNSERLTLGDQNGADWAAQTVAELASLPNVGIMA
RTTVLGAFDHGIFGALERVSDHLPQPAPGKPRQVLWRIYTKGSLLCAGATERPIAFENND
RPGIMLAGAMRSYANRWAVTPAQRVAVFTNNDDGHRTAADLHAKGVAIAAVIDVRPDAPL
SGDYEVIAGGQVINSRGRLGLKSIEVALPGGGKRQLSCGALGVAGGWNPNVHLTSHHRGR
PEWLPQIAAFGPAAEGPKALRVAGAAKGDLSTAGALRGGADEAASWLRENGFRASRLELP
EAEGAPISITPFWAVKGCNRAWLDQQNDVTVKDVKLAHQENFVSVEHLKRYTTLGMATDQ
GKTSNMGGLAIMAELTGKAIPEVGTTIFRPPYTATAIGAFAGRDRGTHFRPTRKTPSHAW
AEEQGAVFVEVGMWLRAQWFPKDGETHWRQSVDREVLATRKSVGICDVTTLGKIDVQGTD
AATFLNKVYCNGFAKLAVGKTRYGLMLREDGIAMDDGTAARLAEDHFVVTTTTANAVSVF
RHMEFARQCLWPDLDVQLISTSEAWAQYAVAGPNARRLLQKIVDPEFDLSNEAFPFMACA
NITVCGGLRARLFRISFSGELAYEIAVPTRYGDAMIRRLMQAGEEFDAMPYGTEALGVMR
IEKGHAAGNELNGTTTALNLGMGRMVSKAKDSIGSTLSERSGLNHAEALKLVGLRPVNLS
DPVPAGSHLMCKGDPVDAAHDQGYVTSACFSPNLGHSIALAYVKSGDSRMGEILRLVSPL
TGFDHEVEVVSAHFIDPEGERLRA
NT seq
2955 nt
NT seq
+upstream
nt +downstream
nt
atgagccaaatcaatcgccttccgggcgggcaaattgaccgcagccagagtttggacttc
accttcgatggcaaggcctaccaaggtcatgcgggcgacacgctggccagcgcgcttttg
gccaatggcgtgcgcctcatggggcgctcgttcaaatatcaccgcccgcgcggcgtttta
accgccggatctgaagagcccaacgccctggtcgagctccgagagggcgcgcgcaaggag
cccaacacccgcgccaccacggccgagctgtttggcggcctgagcgcaaactcacaaaat
aagatcggctcgctgcgctttgatcttatggccataaatgaccgcttcgcaaattttcta
accgcaggattttattacaaaactttcatgtggcccgccaccttttgggaaaaactctac
gagccgattattcgcaaagccgccgggctgggaagtataagcttgcaagaggatcccgac
gcctatgatcgcggctttttgcactgtgatctgctgatcatcggtgcgggccctgccggg
cttgccgccgcgctgaccgcggggcgtgccggcgcgcaggtgatcttggccgatgaggac
ttcaccctcggcggcaggctcaattctgaacgcctcacccttggcgatcagaacggcgca
gattgggcggcacaaaccgtagcagagctggccagtctacccaatgtcggcatcatggcg
cgcaccacagtgctcggcgcctttgatcatggcatttttggcgctttggagcgggtctcg
gaccacctgccccagccagccccaggcaaacccaggcaagtgctctggcggatctatacc
aagggcagccttctgtgcgcgggcgcaaccgagcgccccatcgccttcgaaaacaatgat
cggcccgggatcatgctggccggggcgatgcgcagctatgccaaccgatgggccgtgacc
ccagcgcagagggtggcggtctttaccaacaatgacgacgggcaccgaaccgcggccgat
cttcacgcaaaaggcgttgccattgccgccgtgatcgatgtgcggcccgatgcgccgctc
agtggcgactatgaggtcatcgcaggcggtcaggtgatcaacagccgcggacgtttgggg
ctcaaatccattgaggtcgccctgcccggcggcggaaagcgccagttgtcttgcggggct
cttggtgtggcgggcggttggaaccccaatgtgcatctgaccagccaccaccgcggccgg
cctgagtggctgccacagatcgctgcctttggcccagctgccgagggaccaaaagcgctg
cgcgtggccggcgcggccaagggggatctatccaccgctggcgccctgcgcggcggcgca
gatgaagccgccagctggcttcgcgagaacggatttagagcgtcgaggcttgagctgcca
gaggccgaaggcgcgcccatctccatcacgcccttttgggctgtcaaaggctgcaaccgc
gcttggctcgatcaacaaaatgacgtgacggttaaagacgtcaaattggcccatcaggaa
aatttcgtcagcgttgaacatctcaaacgctacaccacgctgggcatggccacagatcag
ggcaagacgtccaatatgggcgggctcgcaattatggcggagctgactggcaaagccatt
ccagaggtcggcacaaccattttccggccgccctatactgcaacggccattggggccttt
gcagggcgtgatcgcgggacacacttccgccccacccgcaagaccccaagccatgcttgg
gccgaagaacaaggcgcggtctttgtggaagtgggcatgtggctgagggcccaatggttc
ccaaaagacggcgaaacccattggcggcaatctgtcgaccgggaagtgctggccacgcgc
aaatctgtcggtatttgcgatgtcacaaccctcggaaaaatcgacgtgcaaggcacagat
gccgcgacctttctaaacaaggtttattgcaacggtttcgccaaattggccgtcggcaag
acccgttatggattgatgctgcgcgaagacgggatcgccatggatgatggcaccgccgcc
cggctggcggaagatcactttgtggtcacaaccaccacggcaaatgctgtctcagtcttt
cgccacatggaatttgcccgccaatgcctctggccagatctcgatgtgcagctgatttca
acctccgaggcctgggcacaatatgcggtggcggggccaaatgcgcggcggttgctacaa
aagattgttgatccagaatttgacctgtccaatgaggctttcccctttatggcctgcgcc
aatatcaccgtttgcggtgggctgcgcgcccggctgtttcggatctctttctccggagag
ctggcctatgaaatcgcagtgccgacgcgctacggcgatgcgatgatccggcgtcttatg
caggccggagaggaatttgacgcgatgccctatggcacagaagccttaggtgttatgcgc
attgaaaaaggtcatgcggctggtaatgaactcaatggcaccaccacggccctaaatctt
ggtatggggcgcatggtgtccaaggcaaaggacagcatcggctccaccctatcggaacgc
agcgggctgaaccatgcggaggcgctgaaactggttggattgcggcccgtgaacctgtcc
gatccagtacccgccggcagccatttgatgtgcaaaggcgatccagtggatgccgcccat
gaccaaggctatgtcacctccgcctgcttctcgccaaatctgggccattccatagcgctg
gcctatgtcaagtctggcgatagccgcatgggcgaaatcctaaggcttgtcagcccattg
accggctttgatcacgaggttgaagtggtcagtgcccatttcattgatcctgagggggag
cgtctgcgtgcatga
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