Planktomarina temperata: RCA23_c19840
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Entry
RCA23_c19840 CDS
T03229
Symbol
ruvC
Name
(GenBank) crossover junction endodeoxyribonuclease RuvC
KO
K01159
crossover junction endodeoxyribonuclease RuvC [EC:
3.1.21.10
]
Organism
ptp
Planktomarina temperata
Pathway
ptp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ptp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
RCA23_c19840 (ruvC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptp03400
]
RCA23_c19840 (ruvC)
Enzymes [BR:
ptp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.10 crossover junction endodeoxyribonuclease
RCA23_c19840 (ruvC)
DNA repair and recombination proteins [BR:
ptp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
RCA23_c19840 (ruvC)
RecFOR pathway proteins
RCA23_c19840 (ruvC)
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Gene cluster
GFIT
Motif
Pfam:
RuvC
Motif
Other DBs
NCBI-ProteinID:
AII87515
UniProt:
A0AAN0RK10
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All DBs
Position
complement(2126115..2126621)
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AA seq
168 aa
AA seq
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MRVLGIDPGLRSTGWGLVDVHGSKLRHVANGQCQTQPGPLAGRLLALFEGLSEVIENYAP
SHAAVEQTFVNRDGAGTLKLGQARGIAMLVPAKFRLEVGEYAPNAVKKAVVGVGHADKRQ
VEHMVSLQLPGVKLAGPDATDALAIAICHAHHIQAGSHFQAALQRASG
NT seq
507 nt
NT seq
+upstream
nt +downstream
nt
atgcgggtactgggcattgatccgggtttgcgctccacaggctgggggcttgtggatgtg
cacggcagcaaactgcggcatgtggccaatggtcagtgccaaacgcagcctggacccttg
gccggtcgcttgctggcgctgtttgaggggttgtctgaggtgattgagaactacgccccc
agtcatgcggccgtggagcaaacttttgtgaaccgtgatggggcggggacgttgaaattg
ggccaggcgcgtgggattgccatgctggtgccagcgaagtttcgcctcgaggttggagaa
tatgcccctaatgcggtgaaaaaagcggtggtgggcgtggggcacgcggacaagcggcag
gttgagcatatggtgtccttgcagctaccgggtgtgaaactggccgggcctgatgcaaca
gatgcgcttgcgattgccatttgtcacgcgcatcatatccaagcgggcagtcattttcag
gccgcattgcaaagggcgagtggatga
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