Planktomarina temperata: RCA23_c19990
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Entry
RCA23_c19990 CDS
T03229
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
ptp
Planktomarina temperata
Pathway
ptp03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
ptp00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
RCA23_c19990 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
ptp03011
]
RCA23_c19990 (rpsA)
Ribosome [BR:
ptp03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
RCA23_c19990 (rpsA)
Bacteria
RCA23_c19990 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
PLD_C
DUF4851
Motif
Other DBs
NCBI-ProteinID:
AII87530
UniProt:
A0AAN0RK27
LinkDB
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Position
complement(2140684..2142345)
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AA seq
553 aa
AA seq
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MEEFEALLQESFEVDTPEEGTVVKGKVIAIEAGQAIIDVGYKMEGRVDIKEFADPGEAPV
ISVGDTVEVFLRAAENAKGEAVISREMARREEAWDRLEKAYADEERVDGAIFGRVKGGFT
VDLGGAVAFLPGSQVDVRPVRDAGPLMGLKQPFQILKMDRRRGNIVVSRRAILEESRAEQ
RAEVIGKLAEGDSVDGVVKNITEYGAFVDLGGVDGLLHVTDMAWRRVNHPSEILTIGETL
KVQVVKINKETHRISLGMKQLMDDPWDIVSVKYPLESQHKGRVTNITDYGAFVELEAGVE
GLVHVSEMSWTKKNVHPGKIVSTSQEVDVMVLEIDGVKRRVSLGLKQTQRNPWEVFAEQH
PEGSQVEGEVKNITEFGLFIGLEGDIDGMVHLSDLTWEGRGEDVIGDYRKGDMVQAVVSE
VDVEKERISLSVKALGGDKFADAVGGVKRGSIITVEVTAIEDGGIEVEYEGMKSFIRRSD
LSRDRAEQRPDRFGMGDKVDVRVTNIDAKTRRLGLSIKAREIAEEKEAVEQYGSSDSGAS
LGDILGAALKSDE
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atggaagaattcgaagcccttttgcaagaaagcttcgaggttgacacgcccgaagagggc
acagtggtcaaaggcaaagtcatcgcaatcgaagcgggacaggccatcatcgacgtcggc
tacaaaatggaaggccgcgtagatattaaagaatttgcagatcccggcgaagctcccgtc
atctctgttggggatacggtcgaagttttcttgcgtgccgcagaaaacgccaagggcgag
gctgtcatcagccgtgaaatggcccgtcgtgaggaagcctgggatcgtcttgaaaaagcc
tatgcagacgaagagcgtgttgatggcgcaatctttggccgtgtcaaaggtggtttcact
gttgatcttggtggcgctgtggccttcttgccaggcagccaagttgacgtgcgccctgtg
cgggatgcgggcccattgatgggtctgaaacagccgttccagattttgaaaatggaccgt
cgccggggcaatatcgttgtgtcgcgccgtgcgatcttggaagaatcacgtgccgaacag
cgcgctgaagtgatcggcaaactggccgaaggtgacagtgtcgacggtgtggtgaaaaat
atcacagaatacggtgcctttgtggatcttggcggtgttgacggtctgttgcacgtcacc
gatatggcctggcgccgcgtcaaccacccatcagaaatcctgacaattggtgagactttg
aaagtccaagttgtcaaaatcaacaaagaaacccatcgcatcagcctgggcatgaaacag
ttgatggatgatccatgggatatcgttagcgttaaatacccgctggagtcacagcacaaa
ggccgcgtgaccaatatcaccgattacggtgcctttgtggagctggaagcgggcgttgaa
ggtttggtgcacgtgtctgagatgtcttggacaaagaaaaacgtacatccgggtaaaatt
gtatcaacatcgcaagaagttgatgtgatggttctggaaattgatggcgtgaagcgtcgc
gtgtccttgggtctgaagcaaacacagcgcaacccgtgggaagtctttgcagagcagcat
cctgaaggcagccaagtggaaggtgaagtcaaaaacatcactgaatttgggttgttcatc
ggtcttgaaggcgacatcgatggcatggttcacctgtcggatctgacatgggaaggccgc
ggcgaagatgtgattggcgattatcgcaaaggtgacatggttcaggccgttgtctctgaa
gtggacgtcgaaaaagagcgcatcagcctgtctgtcaaagccctgggtggcgacaaattc
gcagatgcggtcggcggcgtgaaacgcggctcgatcatcactgttgaagtcacagcgatc
gaagacggtggcattgaagtcgaatatgagggcatgaagtccttcattcgtcggtctgac
ctgtcacgcgatcgtgctgagcagcgtccagatcgttttggcatgggtgacaaagtggac
gttcgcgtcacaaatatcgatgcgaaaacacgtcgtcttggcctgtccatcaaagcgcgt
gagattgcggaagagaaagaagccgttgagcaatatgggtcatccgactcaggtgcgtct
ttgggcgatatcttgggcgccgcgcttaaatctgacgaataa
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