Planktomarina temperata: RCA23_c20990
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Entry
RCA23_c20990 CDS
T03229
Name
(GenBank) hypothetical protein, OmpA
Organism
ptp
Planktomarina temperata
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Gene cluster
GFIT
Motif
Pfam:
OmpA
ATG16
TMF_DNA_bd
Motif
Other DBs
NCBI-ProteinID:
AII87630
UniProt:
A0AAN0RK26
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Position
complement(2240878..2243121)
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AA seq
747 aa
AA seq
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MALSRRTGARFQASIWPGFVDAMTGLLLVLMFVLTIFAVMQFVLQQTIKGQGVMLDELNV
DIAQKNAQLEDLEGQILALGDALGLERAAASELTLQVAKLDDQLAAAQAQGERQLGLIAT
LTAERDARAADLKAATERINDFETQVANLLALQQRAEGEIERFKLQVSQLQTQQSQSEDT
ILDFETQVASLLREQSQSEGQITELEAQLTLLLAQSLEDTARIADVEAQISALQDEKSTA
EATIADFETRVQQLIEKEALRREELAALDEDKASLQQSLLAAQATIAAQTEQAALAERQR
ELMDEMLADLRRDSQDTNINLANTLALLATQQERASQLEQDNQELSRRAEELTSALNDEE
LNRVSAAFLRERLEAAEAALSQKELEQLSMAAAAEKLRADLEQSEAAISSLTLELNDQRK
KAEETLALLAAAQSVEKTLGEKLATALVALEAAEAEAQNADTDDLRSALSKAIAARQTAE
QQLTSAEQKAALLATAQAELQEAKAISTEAQRKMALLSQEVRELRAQIGGLQATLDDYKR
RDADNNVKITNLGSELNVALAQVAAESKRNLALEAAEKQRLEEEKARLEAEAKTLERYKS
DFFGSLRGLLEDIDGVSIVGDRFVFSSEVLFASGRAELTAAGRQEISKVANILKDVTQEI
PQNIDWVLQVDGHTDDQPILPGSRFQNNWELSQARALSVVLYLMTSEQMPPRRLSANGFG
EYQPINPANSRLARAQNRRIELKLTEK
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atggcactttcccgacgcactggcgcaaggttccaagcctctatctggccggggtttgtc
gatgcgatgactggcctattgctggtcttgatgtttgtgctcacgatctttgcggtgatg
caatttgtgttgcagcaaaccatcaaagggcagggggtgatgctcgacgagctcaacgtc
gatatcgcccagaaaaacgcgcaattggaagatttggaaggtcagatcctcgctctcggc
gatgctttgggtttggagcgcgccgcggcctccgagctcacccttcaggtcgcaaaactt
gacgatcagcttgccgctgcgcaggctcagggcgaaaggcaattgggccttattgcgacg
ttgaccgccgagcgcgatgcccgggctgcagacctcaaagcggccaccgaaaggatcaat
gatttcgagacgcaagtggccaatctcttggcgctgcaacagcgggcggaaggagagatt
gagcggttcaaactgcaagtgtcgcaactgcaaacgcagcagtcccagtctgaagacacg
atcttagacttcgaaacgcaagtggcgtcgcttttgcgtgaacaaagccaatcggaaggg
cagatcacggagctggaagcgcaattgaccctgcttctggcccaatccttggaagacaca
gcccgtattgcagatgtagaggcgcaaatcagtgctttgcaggacgaaaaatccacagcc
gaggctacgatcgcagatttcgagacccgcgtgcagcaattgatcgagaaagaggcgcta
cgtcgtgaggaactggccgcattggatgaggataaggccagtttgcagcaatcattgctg
gcggcgcaggcgacaattgcagcacagaccgagcaggctgcgctggcggaacgacaacgc
gaactcatggatgagatgctggctgatctgcgccgggattcccaggatacaaatatcaac
cttgccaataccctggcgcttttggcgacgcagcaagaacgggcgtcccagcttgaacag
gacaaccaagagctcagtcgccgcgctgaagaattgacaagcgccttgaatgacgaagag
ctcaatcgcgtgtccgcggcttttttgcgggaacgtttggaggccgcggaagccgctttg
agccagaaagaactcgaacaattgtccatggccgcggcggctgaaaaactgcgggcggat
ctggaacaaagtgaagcggcgatatcttctttgactttggagttaaacgatcagcgcaaa
aaagccgaggaaaccctagcgcttttggccgcggcgcagagcgttgaaaaaacactcggt
gagaagttggcgacagctttggtggcacttgaggccgctgaagccgaagcgcagaatgcg
gatacagatgatctgcgttcggcgctgtccaaagccatcgccgcacggcaaactgcggag
cagcaattgacctcggccgagcagaaggcggccttattggcaacggcacaggcggagctg
caggaggcaaaggctatttcgacggaggcacagcgcaaaatggcgctgctgagccaggag
gtgcgcgaattgcgcgcccaaatcggtgggcttcaagccacgctggacgattacaagcgt
cgtgacgcggacaataatgtgaagatcaccaatcttggcagtgagttgaacgtggcgctg
gcacaggtcgcagcggaatccaagcgcaacttggctttggaagcggcggaaaagcagcgc
ctggaagaggagaaggcccggcttgaagccgaagccaagaccctggagcgctataagtcc
gacttttttggcagtctgcgcggtcttttggaggatatcgacggggtcagcatcgttggg
gaccgttttgtcttctcctctgaggtgctctttgcctctggccgtgctgagctgacggcg
gctggccgccaagagatatcaaaagtggcgaatatcttgaaggatgtcacccaagaaatt
ccgcaaaatattgattgggtgttacaggtggatggtcacaccgatgaccaaccaatcctt
ccgggcagtcgctttcaaaataattgggagctaagccaggcgcgggcgctgtctgtggtt
ctatatctgatgacctccgagcaaatgccgccgcgccggctctcggccaatgggtttggc
gagtatcagcccattaatccggccaattcgcgcctagcacgggcgcaaaatcggcggatt
gagctgaaattgactgagaagtaa
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