Planktomarina temperata: RCA23_c21610
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Entry
RCA23_c21610 CDS
T03229
Name
(GenBank) putative polysaccharide export protein
KO
K01991
polysaccharide biosynthesis/export protein
Organism
ptp
Planktomarina temperata
Pathway
ptp02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ptp00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RCA23_c21610
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ptp02000
]
RCA23_c21610
Transporters [BR:
ptp02000
]
Other transporters
Pores ion channels [TC:
1
]
RCA23_c21610
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Poly_export
SLBB_2
Motif
Other DBs
NCBI-ProteinID:
AII87688
UniProt:
A0AAN0RK47
LinkDB
All DBs
Position
2310600..2311748
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AA seq
382 aa
AA seq
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MRIIMIKINKIILIAACFGMMSSCTILPRSGPNKYEVTASTRGENPTAHIVPVTPEVVYE
TKVPTSSGFTKSFLQTKPLNAELIRPGDTLNLTVWENVEDGLLSSGMASAATLSELQVDG
SGHIFVPYAGRIKVAGQTPEEIRHIVTQALQDQTPDPQVEVRRSAGAGATVSIIGSVGGQ
GIYPILHQTRTLSTMLASSGGLDVKPELVRVTVIRGKLRSEVWLDDLYDRPELDIALRDG
DRILIEADRRSFVIMGAAGRQSQVAFDQREISALEALSRAGGLSAYQADPKGVFVLRKED
QSIARRVVGDAEIKGEQHLIYVLNLTEPDALFLARDFTIRDQDTVYITEAPLSTWNKTLR
GIMGGLSTTTSFANTISDLRDL
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
gtgagaataattatgataaaaatcaataagataattttaattgccgcctgttttgggatg
atgtcctcctgtaccatcctgccccgatccggcccaaataaatatgaggtgacagcaagc
acacgcggcgaaaaccccacagcacacattgttcctgtgacgccagaggtggtttatgaa
acaaaagtacctacatcatcgggctttaccaaaagctttttgcaaaccaagccgctgaac
gccgagttgatccgcccaggtgacactttgaacctcacagtttgggaaaatgtcgaggat
ggtcttttgtcctcgggtatggcgagtgcggccaccttgagcgagttacaagtggatggc
agcggtcatatttttgtgccctatgccgggcgcattaaggtcgcaggacaaacgcccgag
gaaattcgccacatcgtcacgcaagcattgcaagaccaaacgcccgatccacaggttgaa
gtacgccgttccgccggagcaggggccaccgtatccatcattgggtccgtcggcggacaa
ggcatctatccaatcctacatcaaacccgcaccctatcgaccatgctggccagctccggg
gggctggatgtcaaacccgaactggtgcgtgtgacggtcattcgtggaaagctgcgcagc
gaagtttggctcgatgacctttacgatcggccggagctggatattgccctgcgcgatggc
gaccggatccttatcgaagccgatcgacgcagcttcgtcatcatgggtgccgccgggcgg
caatctcaagtggctttcgatcagcgggaaatttcagcgcttgaggcgctgtcacgtgca
ggcgggctaagcgcatatcaggccgaccccaagggcgtttttgtcttgcggaaagaggat
cagtccatcgcccgccgcgtggttggtgacgccgagatcaaaggcgagcaacatctcatc
tatgtgttgaacttgaccgaaccagacgcgctgttcctcgcccgagattttacaatccgc
gaccaggacaccgtgtatatcacagaggcgccactttcgacgtggaacaaaacactccgc
ggtatcatgggcggtttgtcgacaaccacaagctttgccaatacgatcagcgacctcaga
gacctgtaa
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