Planktomarina temperata: RCA23_c21940
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Entry
RCA23_c21940 CDS
T03229
Name
(GenBank) HTH-type transcriptional regulator, LacI family
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
ptp
Planktomarina temperata
Brite
KEGG Orthology (KO) [BR:
ptp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ptp03000
]
RCA23_c21940
Transcription factors [BR:
ptp03000
]
Prokaryotic type
Helix-turn-helix
LacI family
RCA23_c21940
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GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
Peripla_BP_4
LacI
Motif
Other DBs
NCBI-ProteinID:
AII87718
UniProt:
A0AAN0RK70
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Position
2345518..2346576
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AA seq
352 aa
AA seq
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MQALTFIKSNKWEIIMRDSNRPSLEDVAALAGVSTASISRCINSPQKVAEPTRQRIQNAI
ETLGYVPHFGGRALARNRTNTIGAIIPTMDNAMFASGLQAFQETLSAAGVTLLVGSSNYD
PDQEFDAIRSLLSQGADGLLLIGAARPEKTQAFLTQHAVPHVLAWCCPKTGHSPSVGFDN
QKSGHDIAAHVLAHGHRKLAVICGLREGNDRATARVVGIKQAIASQSDAQLLGLEECKYS
FEEAGAAFAQLLTGPEKASAVICGSDVLAVGALLQARKMGLRVPEDISITGFDDISLAQV
TTPSLTTVRVPQHSMGRKAAEVLLALLNQEPGQNLRHELMTTIIDRGTLARI
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcgcttacattcatcaagagcaacaaatgggaaattatcatgcgcgacagcaat
cgcccaagcctcgaagacgtggccgcattggccggcgtgtcgacggcgtccatttcacgt
tgcatcaattcgccccaaaaagtcgcggaacccacccgacagcggattcaaaatgccatt
gagacgctcggctatgtgccccatttcggcggtcgtgctttggcacgcaatcgcaccaat
accattggtgcaatcattccgacgatggacaacgcgatgttcgccagcggcctgcaagcc
tttcaagagacactcagtgctgccggggtgaccctgctggttggcagctcaaactatgac
ccggaccaggagttcgacgccattcgctctttgctgtcacagggcgccgatgggttgttg
ctgattggggcggcgcggcccgaaaaaacccaggcttttttaacacaacacgccgtgccg
catgtcttggcatggtgctgcccaaaaacaggccactcgccaagcgtcggctttgacaat
caaaaatcgggccatgatatcgcggcgcatgttttggcccatgggcaccggaaattggcg
gtgatttgcggcctaagagagggcaatgatcgcgccaccgcccgcgttgtaggcatcaaa
caagcaatcgcaagtcaaagcgatgcgcaattattgggtcttgaagagtgtaaatatagt
ttcgaggaggccggcgccgctttcgcgcagcttctgaccgggccagaaaaagcctcagca
gtgatttgcggcagtgatgtgttggcggtcggcgccttgctgcaagcccgcaagatggga
ttgcgcgtaccagaagacatttcaatcaccggatttgacgatatttccttggcgcaagtc
accacgcctagcctgacaaccgtgcgcgtgccgcagcactcaatgggccgtaaggcagca
gaggtcttgctggccttgctcaatcaagagcccgggcaaaacctacggcacgagctgatg
acaaccatcatcgaccgcggcacccttgcgcggatctag
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