Planktomarina temperata: RCA23_c23340
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Entry
RCA23_c23340 CDS
T03229
Name
(GenBank) putative rhamnose ABC transport system, substrate-binding protein RhaS
KO
K10559
rhamnose transport system substrate-binding protein
Organism
ptp
Planktomarina temperata
Pathway
ptp02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ptp00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RCA23_c23340
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ptp02000
]
RCA23_c23340
Transporters [BR:
ptp02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Rhamnose transporter
RCA23_c23340
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
FlgD_ig
Motif
Other DBs
NCBI-ProteinID:
AII87857
UniProt:
A0AAN0RKK0
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All DBs
Position
complement(2481056..2482093)
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AA seq
345 aa
AA seq
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MKVWKVSTLAVCAALAGSIASAETAIAQKGLEADMVLLPKFLGILPFDQANQGAQEAHEE
LGNTGDLLYTGPTPENSVAGQIEIMTTSASQKRAAVMLSNNAGEQIVPSAVAAQAAGTKV
VTWDSPIPSAKGESLFIAQVDFGEIGVVMADMAHSILDGEGEFATLSATPDASNQNAWIA
AMEEALKGPKYAGLKHVDIVYGNDQSEVSYNRALALADKYPNLGLIMSPTSVGIVASAKA
IQDEDLCGQIKVSGLGVPAEMVTYTMNGCAPEFALWDFVDLGYLTYYTSYMLATGQIEGE
AGETFNAGRMGDYTIEKDPTRDAGLRVLMGPFTVYNKDNVEAAAK
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtatggaaagtctctacgcttgctgtgtgtgctgcattagcagggtcaatcgca
tcggctgaaacggccattgctcaaaagggtttagaagccgacatggtgcttctgccaaaa
ttccttggaattttgccctttgatcaggcaaatcaaggtgcgcaagaagcgcatgaagaa
ctcggtaataccggtgatctgctttatactggtccaacacctgagaactcagttgcaggc
caaatcgaaatcatgacaacatcagcctcacaaaagagggctgcagttatgctgtccaac
aacgcaggtgagcaaattgttccatcagctgtcgctgcacaagctgctggcaccaaagtt
gtaacttgggattcgcctattccttccgcgaaaggggaatcgctttttattgcacaggtt
gattttggtgaaatcggcgtggttatggcagatatggcccacagcattcttgacggtgag
ggtgagtttgcaaccttgtctgcaacaccagacgcttcaaaccagaatgcttggattgcg
gctatggaagaggcgttgaaaggtcctaagtatgcgggccttaaacatgtcgacattgtt
tacggtaatgaccaatccgaagtaagctacaaccgcgcacttgcgttggcagataagtac
ccaaatctgggtctgattatgtcgcctacttctgtgggtattgttgcgtccgcgaaagcg
atacaggacgaggatctttgtggtcaaatcaaagtctctggccttggcgttccagccgaa
atggttacctacactatgaatggttgtgcgcctgaattcgcgctctgggacttcgttgat
cttgggtacctgacctactacaccagctacatgctggccacaggtcagatcgaaggcgaa
gctggtgagaccttcaatgcaggccgtatgggtgactatacaatcgagaaggatccaaca
cgtgacgcaggattacgcgttctaatgggaccattcacagtttataacaaagacaacgtc
gaagctgctgcgaagtaa
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