Planktomarina temperata: RCA23_c24510
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Entry
RCA23_c24510 CDS
T03229
Name
(GenBank) putative HTH-type transcriptional regluator, LysR family
KO
K21645
LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT
Organism
ptp
Planktomarina temperata
Brite
KEGG Orthology (KO) [BR:
ptp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ptp03000
]
RCA23_c24510
Transcription factors [BR:
ptp03000
]
Prokaryotic type
Helix-turn-helix
LysR family
RCA23_c24510
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
Motif
Other DBs
NCBI-ProteinID:
AII87973
UniProt:
A0AAN0RKN0
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All DBs
Position
2589879..2590763
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AA seq
294 aa
AA seq
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MDLNWLRDFECLARTLNFTRASNERNITQSAFSRRIKALENWVGLPLVNRATYPIQLTEA
GHNFLPTAKAAIAQLNESRQSIRDADRGDTRFVRISALHTISMNYLAHQIERIQKEIPEL
RTRVISDSLSTCCELLLEGAVDIMLVYYHQYVSPKIDDTGFERKDLLSDLLIPVAAREVA
EARGWHLSNSGGTPIPYLAYEQSSFLGQVVENSISIETLNIETIYIDGLVETIRRRLLQG
SGFAWMPQTAVETELENGSLIAIGDQSLNVSLTISALANPTYFDDSARKMWSLL
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atggacctgaattggctaagagattttgagtgtttggcgcgcactctgaatttcaccaga
gcatctaacgagcgtaacatcacccaatctgccttcagtcgtcggatcaaggctctcgaa
aactgggttgggctgcccctggtcaaccgcgccacctaccccattcagctcacagaagcc
gggcacaactttctgccaacagccaaggcggccatcgcgcagctcaacgaaagccgtcaa
tccatccgcgatgcagatagaggcgatacgcgcttcgtccgaatctccgctctgcacacg
atatctatgaattatctcgcccatcaaatcgaacgcattcaaaaagaaatcccagagttg
cgcacacgggtgatctcggattccctgagcacctgttgcgagctgctgctcgaaggggcg
gttgatatcatgttggtctattaccatcagtatgtatcgccgaaaatcgatgacacaggc
tttgagcgcaaggatctcttatcagatttattaattcctgttgccgcccgtgaggtcgcc
gaagcgcgggggtggcacctctccaacagcggcggcactcccatcccttatctggcctat
gaacaatcgtcgtttttggggcaagtcgttgaaaattctatttcgattgagactttaaac
atcgagaccatctatattgatgggctggttgaaaccatccgccgccgcctcttacaagga
agcggctttgcctggatgccccaaaccgccgttgaaacagagttggaaaatggaagtctg
atcgccattggcgaccagagcttgaatgtctctctgaccatttccgccctcgccaatccc
acttattttgacgatagcgcccgcaaaatgtggtctttgctctag
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