Planktomarina temperata: RCA23_c24670
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Entry
RCA23_c24670 CDS
T03229
Name
(GenBank) putative ribose ABC transporter, substrate binding protein RbsB
KO
K02027
multiple sugar transport system substrate-binding protein
Organism
ptp
Planktomarina temperata
Brite
KEGG Orthology (KO) [BR:
ptp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ptp02000
]
RCA23_c24670
Transporters [BR:
ptp02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Putative multiple sugar transporter
RCA23_c24670
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Gene cluster
GFIT
Motif
Pfam:
SBP_bac_1
GCV_T_C
Motif
Other DBs
NCBI-ProteinID:
AII87989
UniProt:
A0AAN0RKQ8
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Position
2604859..2606439
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AA seq
526 aa
AA seq
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MLQGAASVGAIAAMGGLFPKQVAAGGHSAVRAEILKIPGVGAGSPTDADWQKVGDLCLGP
TKERVAEGEFEGVELTFMGLNNQNLHNFLFRGFLKPWEAYTGAKINWVDLAQADYNPRLQ
QAIATGTVDFDLIEMGAPFEGDTAGKGLLDEMPAWVEEQIEADDLVSYLQAPVGTWNGKK
YRVTIDGDCHTFCYRTDYFGDGAIGGASVPKTWQEVNAASKELIGKEDPLTGLPAHGYLD
PLKGWGGFGFYFLENRAAAYAKHPSDPAWLFDPDTMKPRVNNPAWVQAIQDVLDLIEAGA
YPADQINADPGTTGFQQFLAGTGSMLMWWGDIGSNARTSDTSVVGDVVGFGINPGSDRVY
NSQSGAWENTYNEAPNMAYLGWGVYVTKNVQGDEKKQKAAWSAAAHLGGKDISLWMSAYP
SGFQPYRNSHFQYDEWEAAGYDRAYIEDYLGSNADSYNHENAAIEPRIPGIFQYYSVAED
ELAKGYAGQYGSAQEIGDAIAAAWEKITDQIGRDSQIALYKASLGL
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgctacaaggcgctgcaagcgttggcgcaattgctgcgatgggaggcctgttccccaaa
caagttgccgccggtggtcactctgcagtgcgcgccgaaattttgaaaattccgggtgtt
ggcgccggttcaccgactgacgcagactggcaaaaagtaggtgacctttgccttgggcca
acgaaagaacgtgtggctgaaggtgaatttgagggggttgagctgacctttatgggatta
aataatcaaaaccttcacaacttccttttccgcgggttcttaaagccttgggaggcttac
acgggcgctaagatcaattgggtagatctcgcacaagcagactacaatccacgcctgcaa
caagcgattgccacaggcacagttgacttcgatttgatcgaaatgggtgccccttttgaa
ggtgacacagctggaaaaggcctactcgatgaaatgccagcctgggtcgaggagcagatc
gaggctgacgatcttgtgagctacttgcaggcaccagttggaacctggaatggtaagaaa
taccgtgtcaccatcgacggcgattgtcacacattctgctataggaccgactattttggc
gacggcgcaattggtggcgcatctgtgcccaagacgtggcaagaggtaaacgctgcttcc
aaagagttgatcggcaaagaagacccactcacagggctgcctgcccatggttatcttgat
ccgctcaaaggctggggtggtttcggcttctacttcctagaaaaccgcgcggcggcttat
gccaaacacccatcagatccggcatggttgtttgacccagacactatgaagccgcgggtc
aacaacccggcttgggtgcaagcgattcaagacgttcttgatctcatcgaagcgggtgct
tatcctgctgaccaaatcaacgctgatccaggcacaacgggcttccagcagtttcttgct
ggtactggttctatgttgatgtggtggggcgacatcggttcaaacgcacgcacctcagac
acatctgtggtcggcgatgtcgttggctttgggatcaaccccggttctgatcgcgtttac
aacagccaaagcggcgcttgggaaaacacctacaatgaagcacctaacatggcctacctc
ggctggggtgtttacgtcaccaaaaacgttcaaggagacgagaaaaaacaaaaagcggcg
tggagcgcagcagcgcatttgggcgggaaagacatttcactttggatgtcagcctatcca
tccggtttccaaccttaccggaactcgcacttccagtacgatgaatgggaggcagcaggg
tacgatcgtgcctatatcgaagattacctcggctcaaatgcagacagctacaaccacgag
aatgctgctatcgaaccgcgtatcccgggtatttttcagtactactcagttgccgaagat
gaattggcgaagggttatgctggtcaatacggatctgctcaggaaatcggcgatgccatc
gccgccgcttgggaaaagatcacagatcagattggccgggacagtcagatcgcgctttac
aaagcttcacttgggctttga
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