Planktomarina temperata: RCA23_c25500
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Entry
RCA23_c25500 CDS
T03229
Symbol
kdsB
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase KdsB
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
ptp
Planktomarina temperata
Pathway
ptp00541
Biosynthesis of various nucleotide sugars
ptp01100
Metabolic pathways
ptp01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
ptp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
RCA23_c25500 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
ptp01005
]
RCA23_c25500 (kdsB)
Enzymes [BR:
ptp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
RCA23_c25500 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
ptp01005
]
Lipid A
RCA23_c25500 (kdsB)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
IspD
Motif
Other DBs
NCBI-ProteinID:
AII88068
UniProt:
A0AAN0RKV8
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All DBs
Position
complement(2696491..2697297)
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AA seq
268 aa
AA seq
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MTDKTVIIIPARYASTRFEGKPLAMLTGSTGARKSLIQRSWETACDVPSVDGIFVATDDQ
RIADAVHNFGGQVIMTSQNCRNGTERVAEAVQKLPEPADIVVNLQGDAPLTPPWFITALI
EEMKGDSTVEMATPVLRCDGLTLNMFREDRRNGRVGGTTAVFDQNWDALYFSKEVLPFTD
KTYADDEQTPVYHHVGAYAYRPTSLARYIRWPERSLERLEGLEQLRLLEHGVKIRCVLVD
AQGRVFWELNNPVDVARIEKVLQAKGWP
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgacagataaaaccgtgatcattatccccgcgcgttatgcgtcaacgcgatttgaaggc
aagcctttggcaatgttgaccggctctactggcgcgcgcaagtcacttattcaacgcagt
tgggagacagcctgcgatgtgcccagcgttgatgggatatttgtggccacggatgatcag
cgcatcgctgatgcggttcataactttggcggccaagtgattatgacctcacagaactgt
cgcaacgggacagagagggttgcggaagccgttcagaaattgccagagcctgcggatatt
gtggttaatttgcaaggggatgcgccgctgaccccgccgtggtttatcacagctttgata
gaggagatgaaaggcgattcgactgttgagatggcgacgccggtgctgcgatgcgatggg
ctgacattgaatatgtttcgtgaagatcgccgcaatggacgggttggtggcacaaccgca
gtcttcgatcaaaattgggatgcgctatacttttcgaaagaggtattgcccttcaccgac
aaaacctatgctgacgatgagcaaacccccgtctatcaccatgttggggcctatgcgtat
cgcccgaccagtttggcgcgatatatccgctggccggaacgaagtttggagcgtctggag
gggctcgagcagttgcgtctactcgaacatggcgtaaaaattcgatgtgttttggtggat
gctcagggccgcgttttttgggagctgaacaatcctgtggatgtggcccggatcgagaag
gtgctgcaggccaaaggctggccctag
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