Planktomarina temperata: RCA23_c25710
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Entry
RCA23_c25710 CDS
T03229
Symbol
rnc
Name
(GenBank) ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
ptp
Planktomarina temperata
Brite
KEGG Orthology (KO) [BR:
ptp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptp03019
]
RCA23_c25710 (rnc)
03009 Ribosome biogenesis [BR:
ptp03009
]
RCA23_c25710 (rnc)
03036 Chromosome and associated proteins [BR:
ptp03036
]
RCA23_c25710 (rnc)
Enzymes [BR:
ptp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
RCA23_c25710 (rnc)
Messenger RNA biogenesis [BR:
ptp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
RCA23_c25710 (rnc)
Ribosome biogenesis [BR:
ptp03009
]
Eukaryotic type
90S particles
RNase
RCA23_c25710 (rnc)
Prokaryotic type
rRNA processing factors
RCA23_c25710 (rnc)
Chromosome and associated proteins [BR:
ptp03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
RCA23_c25710 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
AII88089
LinkDB
All DBs
Position
complement(2723057..2723740)
Genome browser
AA seq
227 aa
AA seq
DB search
MIKLSSELRQFSADIGYEFKDPGLLITALTHSSISSATRSDNERLEFLGDRVLGLVMAQA
LLDLDAKATEGQLAPRFNALVRKETCADVARSIGIGNLLKLGRSEMISGGRRKEALLGDA
MEALIAAVYRDGGFTEAQALILRLWNTRITSVKADARDPKTALQEWAQARKGPPPNYVEL
SRSGPDHAPQFEIEVRLHSGEAAQAKAGSKRQAEQAAAKLLLERLGA
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaactttcttctgagttacgccagttttcagccgatatcggctatgagtttaaa
gacccggggctcctgatcacagctttgactcattccagtatctcctcggcaacccgctcg
gacaacgaacggcttgagtttctgggtgaccgggttcttgggctcgtgatggcgcaggct
ttgttggatctggatgcgaaggcgaccgaggggcaattggcgccgcgttttaatgctctg
gtgcgcaaggaaacctgtgcagatgtggcgcgctctattggcattggcaacctgttgaaa
ttgggtcgctctgagatgatcagcggcgggcggcgcaaggaagcattgctgggcgatgcc
atggaagcgctgattgctgcggtgtatcgcgatggtggctttactgaagcgcaggcgctg
atcttgcggctttggaatacgcggatcacctccgtcaaggccgatgcgcgcgacccaaag
accgctttgcaagaatgggcgcaggcgcgcaaaggtcctccaccaaattatgttgaactg
tcccgctccggcccggatcacgcgccgcaattcgagattgaagtgagattgcattccggc
gaagcggcgcaggccaaagctggatcgaaacgccaggccgaacaggctgcggcaaaatta
ttgttggaaaggttaggggcatga
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