Planktomarina temperata: RCA23_c25770
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Entry
RCA23_c25770 CDS
T03229
Symbol
rpoZ
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
ptp
Planktomarina temperata
Pathway
ptp03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ptp00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
RCA23_c25770 (rpoZ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptp03021
]
RCA23_c25770 (rpoZ)
03400 DNA repair and recombination proteins [BR:
ptp03400
]
RCA23_c25770 (rpoZ)
Enzymes [BR:
ptp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
RCA23_c25770 (rpoZ)
Transcription machinery [BR:
ptp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
RCA23_c25770 (rpoZ)
DNA repair and recombination proteins [BR:
ptp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
RCA23_c25770 (rpoZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
MCM6_C
Motif
Other DBs
NCBI-ProteinID:
AII88095
UniProt:
A0AAN0RKZ1
LinkDB
All DBs
Position
complement(2728686..2729039)
Genome browser
AA seq
117 aa
AA seq
DB search
MARVTVEDCVDKVPNRFDLVMLAAHRAREIASGSPVTVDRDNDKNPVVSLREIADETQMV
DDLLERLIESNQTQIEVDEPEEDSMALLMGGEPDKPAEDDLNDEKLLRALMEAQGQP
NT seq
354 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgtgtcacagttgaagattgtgtagacaaggttccaaatcgttttgatctggtc
atgctggcggctcatcgggcgcgcgagattgccagtgggtctccggtgactgtagatcgc
gacaacgacaaaaaccctgtcgtttccctgcgtgaaattgccgatgaaactcaaatggtc
gatgatctgcttgagcggttgattgaaagcaatcaaactcaaatcgaagtcgacgagccg
gaagaagattccatggccctgttgatgggcggcgagcctgacaagccggctgaagatgat
ttgaacgacgaaaaattgctgcgtgctttgatggaagctcaaggccaaccttaa
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