KEGG   Planktomarina temperata: RCA23_c25990
Entry
RCA23_c25990      CDS       T03229                                 
Symbol
cobD
Name
(GenBank) cobalamin biosynthesis protein CobD
  KO
K02227  adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
Organism
ptp  Planktomarina temperata
Pathway
ptp00860  Porphyrin metabolism
ptp01100  Metabolic pathways
ptp01240  Biosynthesis of cofactors
Module
ptp_M00122  Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin
Brite
KEGG Orthology (KO) [BR:ptp00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00860 Porphyrin metabolism
    RCA23_c25990 (cobD)
Enzymes [BR:ptp01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.1  Acid-D-ammonia (or amine) ligases (amide synthases)
    6.3.1.10  adenosylcobinamide-phosphate synthase
     RCA23_c25990 (cobD)
SSDB
Motif
Pfam: CobD_Cbib
Other DBs
NCBI-ProteinID: AII88117
LinkDB
Position
2747235..2748140
AA seq 301 aa
MTLFLALVLDALLGEPKWLWSRMPHPAVLMGNLIARATSMFNHAPHQKPKGVILCIGLAG
LGGLAGLVLAQLGPLAEILVTAILVAQRSLMQHVQDVAQSLRLSLAAGRRSVAMIVGRDT
AQMDAPQVARGAIESAAENFSDGIAAPVFWFALAGLPGVIIYKMINTADSMIGYKNETYR
DFGWACARLDDLLNWAPARLSAFGIWLITGCRTSWGTIISEAKLHRSPNAGWPEAAMAYA
LDISLSGPRSYEGKFEKFPWVNAAGRKNIGPVAIEKSIQTLWLTWGAMTLLVAGMTLAFL
L
NT seq 906 nt   +upstreamnt  +downstreamnt
gtgaccctgtttttggcccttgttctggatgcgctgctcggcgagccaaagtggctctgg
tcacgcatgccgcatccagccgtgctcatgggcaatctcatcgcccgcgccaccagcatg
ttcaatcatgcaccccatcaaaaacccaaaggtgtgattttatgcatcggattggctggg
ctaggcgggctcgccgggcttgttttggcgcaacttgggcctctggctgaaattttggtc
actgcaatcctcgtggcacagagatccttaatgcagcatgtgcaagacgtggcccaatcc
ctgcggctgtcacttgccgccgggcgcaggagcgtggccatgattgttggacgtgacaca
gcccagatggatgccccgcaggtggcccgcggggccattgaaagcgcggcagaaaatttt
tccgatgggattgcagcacccgttttttggttcgcactggcaggtttgcccggggtgatt
atctataaaatgatcaacaccgcggacagtatgattgggtataagaacgagacatatcgg
gacttcggatgggcctgcgcccggctggatgatctgctgaattgggcgcccgcccggctg
tccgcctttggaatttggctgatcaccggctgtcgcacctcctggggcactatcatctct
gaggcgaaattgcaccgctccccaaatgccggctggcccgaggctgcgatggcctatgcg
cttgatatcagcctctcaggcccccgcagctatgaggggaaattcgagaaatttccttgg
gtcaacgccgctggccgcaaaaacattggtccggttgcgattgaaaaatctattcaaact
ctctggctgacctggggcgcgatgacgcttttggtggcgggcatgacccttgcatttttg
ttgtaa

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