Planktomarina temperata: RCA23_c26010
Help
Entry
RCA23_c26010 CDS
T03229
Name
(GenBank) putative chromosome partition protein smc
KO
K03529
chromosome segregation protein
Organism
ptp
Planktomarina temperata
Brite
KEGG Orthology (KO) [BR:
ptp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ptp03036
]
RCA23_c26010
Chromosome and associated proteins [BR:
ptp03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
RCA23_c26010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_21
AAA_23
AAA_15
SMC_hinge
ABC_tran
AAA_29
Motif
Other DBs
NCBI-ProteinID:
AII88119
LinkDB
All DBs
Position
complement(2749505..2752960)
Genome browser
AA seq
1151 aa
AA seq
DB search
MRFSKLRLNGFKSFVDPTDLIIADGLTGVVGPNGCGKSNLLEALRWVMGENRPTAMRGGG
MEDVIFAGTATRPARNFAEVSLQIDNSKRLAPASFNESDLLDVVRRITRDIGSAYKANSK
DVRARDVQMLFADASTGAHSPALVRQGQISELINAKPKARRRILEEAAGISGLYARRHEA
ELKLRGAETNLSRVDDVIEQLANQLSQLARQAKQAARYRELGASLRLAEGLLLYRRWQEA
EEARAAAEEALRAGTLTAAQAETAVQKSVKAREICEAALPPLREEEAIANAVLQRLNVQK
DTLSDQAKRAEQTIHTLEQRIAQLAADMAREQNLNADAGDTIARLREELAELEEAGAGQS
EKVQKAAAEASQAAAVLHDRESQLAEITEDVARLAASHQSADRFVEDAQKRLSKAEAEEI
NAKSAVAEASTQASDAAAAYAQAHLDEAAAVEAVAQAETALAEAEARRAECLTQENSART
ARSEANGVVNALQAEVSALAKLVERNRGQGDQLLDQVHVESGYEKALGAALADDLKAPAV
TADGRSGWAQLQDYDTAPRLPEGVESFGQYVTVPGVLNRRIAQVGLVTAEEGARLHGSLL
PGQRLVSRDGDLWRWDGFRAQAKDAPSAAALALEQRNRLQALQSQLKEAQAVASQAETAH
QALVGQLQTLTKTDQETREARQAADRMMADAGRALSRAEAERNLAGGRVEALALAVTRYG
EEASEARVQLRDAQTHREGLEDLGAARARVEDIRLTVEASRVTMMSRRAAHDELRSDGEA
RVKRIAAVNKDISSWQERLGNAKTRAVELEQRHSKAEADLATALAEPDNIRSQRAELISA
LEEAETRRKLAADTLARAEMDMRQASEAERDAGRVATESREKRAGAEARSEAALEAVGLA
AERIREELQTEPQNLLEQLEVDPLKMPPSEQVEAEVARLRRQREALGAVNLRAEEDSQEV
REEFDMLTKEKTDLEEAIKTLRGGIASLNKEGRERLLAAFDEVNRNFGTLFSHLFGGGEA
NLVLVESDDPLDAGLEILCQPPGKKLSTLSLLSGGEQTLTAMALIFAVFLANPAPICVLD
EVDAPLDDANVTRFCDLLDEMTRRTDTRFLIITHHAVTMARMDRLFGVTMAEQGVSQLVS
VDLKKAEQLVA
NT seq
3456 nt
NT seq
+upstream
nt +downstream
nt
gtgcggttttcgaaattacgattgaacgggttcaaaagctttgtggaccccacagattta
attattgcagatggcttgaccggagtggtcggccccaatggctgcggcaaatcgaatttg
ctagaggcgctgcgctgggtcatgggcgagaaccgcccgacggccatgcggggtggcggg
atggaggatgtcatcttcgcaggaaccgccacacgtccggcccgtaattttgcagaagtc
agtttgcaaatcgacaacagcaaacggctggctccggcgagctttaatgaaagtgatctt
ttggatgtggtccgccgcatcactcgcgatattggctctgcctataaggccaatagcaaa
gacgtgcgggcgcgggatgttcagatgctttttgccgatgccagcacgggtgcgcattct
cctgctcttgttcggcaggggcagatcagtgaattgatcaatgccaaacccaaggcccgg
cgtcggattttggaagaggcggccggaatttcgggtctctatgcgcggcggcatgaggcg
gagctgaaattacgcggcgctgaaacgaacctgtcacgcgtggatgacgtgatcgaacaa
ttggccaatcaattatcccaattggcgcggcaggcgaaacaagccgcccgctatcgagag
ttgggggccagtctgcgtttggctgaagggctcttactgtatcgccgttggcaagaggca
gaagaggcccgcgcggccgcagaagaggctctgcgcgccggtacgctcacagcggcacag
gctgaaaccgcagttcagaaatctgtgaaggcccgcgagatttgcgaggcggccttgccg
cccctgcgcgaggaggaggccatcgccaatgccgtgttgcagcggctgaatgtgcaaaaa
gacacgctcagcgatcaagcgaagcgggctgagcaaaccattcacactttggagcaacgc
atcgcccagctggcggctgatatggcgcgggagcaaaacctgaatgccgatgccggcgat
acaatcgcgcggctgcgcgaagaactggcagagcttgaagaggccggggccgggcagagc
gaaaaagtgcaaaaagcggccgcggaggcctcacaggcggcggctgttttgcacgatcgt
gaatcgcaattggcggagattaccgaagatgtagcccgtctcgccgccagccatcaatcg
gcggatcgcttcgttgaggatgcccaaaaacgcctgtccaaggctgaggccgaagagatc
aatgccaagtcggcggtggctgaggccagcacacaggccagtgacgccgcagcggcctac
gcgcaagcccatcttgatgaggcggccgctgttgaggccgtcgcccaggccgaaacggct
ttggctgaggcggaggcgcgacgggcggagtgcctgacccaagaaaacagtgcacggact
gccaggtccgaggcaaatggggtcgtcaatgcgttgcaggcagaagtctccgcactggcg
aaattggtggaacgcaaccgcggtcaaggcgaccaattgcttgaccaagtgcatgttgaa
agcggatatgaaaaggctttgggcgctgccttggccgatgatctcaaagccccggccgtg
accgcggacgggcgctcaggctgggctcagctgcaggactatgacaccgcgccccgcctg
ccggagggcgttgaaagttttgggcaatacgtcactgttcccggcgtgttgaaccgcagg
attgcacaagttggtcttgtgacagccgaggaaggtgcgcggctgcatgggtctctttta
ccagggcaaagactggtcagccgagatggcgatctttggcgttgggatgggtttcgcgcc
caagccaaggacgccccctctgcggcggccttggcgctcgagcaacgcaatcgccttcag
gctttgcaatcacagttaaaagaggcgcaggcggtggcaagccaagcggaaactgcgcat
caagcgctggttggtcaattgcaaaccctgacaaaaaccgatcaagagacccgcgaggcg
cgccaggccgcagatcggatgatggccgatgcggggcgtgctttgtctcgggctgaggcg
gagcgcaatcttgccggcgggcgcgttgaggccctggcgctcgctgtcacacgctatggg
gaagaggcgagtgaagcgcgcgtgcagctgcgtgacgcacaaacccaccgcgaaggcttg
gaagatcttggcgctgcgcgggcacgggtggaggacattcggctgaccgttgaagccagc
agggtcactatgatgagccgccgtgcggcacatgatgagctgcgcagtgatggcgaagca
cgggtcaagcggattgcggcagtgaacaaagatattagcagctggcaagagcgtttggga
aatgccaaaacgcgcgccgtcgagctggaacagcgccacagcaaggctgaagcagacttg
gcaacagcacttgcagagcccgataacataagaagccagcgggcagagctcatctccgcg
ttagaggaagcggaaacgcgccggaaattggccgctgataccttggcgcgggccgagatg
gacatgcgccaagcgtctgaggccgagcgtgatgctgggcgcgtggccacggaaagccgc
gaaaaaagggctggcgctgaggcgcgctctgaagctgctttggaggcggtgggtttggcg
gcggagcgcatccgtgaggagctgcaaacagagccgcaaaacctgctggaacaattggag
gtcgacccgctgaaaatgccgccctctgaacaggtggaggcagaggtggcgcgtttgcgc
cggcaacgagaggcgctgggcgcggtcaacctgcgggcggaagaggattctcaagaggtg
cgcgaggaatttgatatgctcaccaaagagaaaacagatttggaagaggcaatcaaaacg
ctgcggggtgggattgccagtctcaacaaagagggccgggaacgcttattggccgctttt
gatgaggtgaatcgcaacttcggcactctgttttcgcatttatttggcggcggcgaggcg
aatttggttttggtggagagcgatgatccgttggatgctgggctggaaattttgtgtcaa
ccaccgggtaagaagctctcgaccctctcgctgttgtcgggcggtgagcagactttgacg
gcgatggcgcttatttttgcagtcttcttggccaatcccgcgccgatttgtgtgcttgat
gaggtggatgcgccattagatgatgcaaatgtcacaaggttctgcgacctgctcgatgag
atgacccgcaggacggacacgcggtttttgatcatcacccaccatgcggtgaccatggcg
cgtatggaccgtttgtttggtgtgacgatggcggagcaaggggtcagccagttggtttcg
gttgacctgaagaaagccgagcaactggtggcctag
DBGET
integrated database retrieval system
