Planktomarina temperata: RCA23_c26660
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Entry
RCA23_c26660 CDS
T03229
Symbol
phrB2
Name
(GenBank) deoxyribodipyrimidine photo-lyase PhrB
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
ptp
Planktomarina temperata
Brite
KEGG Orthology (KO) [BR:
ptp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptp03400
]
RCA23_c26660 (phrB2)
Enzymes [BR:
ptp01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
RCA23_c26660 (phrB2)
DNA repair and recombination proteins [BR:
ptp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
RCA23_c26660 (phrB2)
Prokaryotic type
RCA23_c26660 (phrB2)
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AII88182
UniProt:
A0AAN0VJL1
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Position
2820022..2821635
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AA seq
537 aa
AA seq
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MILTIPPISHTPCVIAQTIRTNQKLKMSQTHNIVWFKRDLRVNDHAPLLSASRQDAPVIP
LYIVEPDQWLQPDASRRHWHFIHDCLSDLNKELRELGQELIIKIGHAADIFAQLHSDYHI
GTIYTHEETGNLWSYQRDIAVQNLCSGLDIELRTTPTNGIVRKLRSRDSWSNIRNKRMME
AIHPRPNALPSVERCQSDPLPDKCDPMFGNLPIGRVQKGGRIQAVKDLRSFLNHRSRGYL
SHISAPNQSEFYCSRLSGHLTFGTLSAREVSQSIAKRRGQLSPEENKSFGRNLRAFESRL
AWRCHFIQKIEDQPEIETHCMHPAFANLRETAHNPKQFQAWANGKTGYPFIDACMRNLTA
EGWITFRMRAMLVSFASYQLWLDWRVTGPHLARLFTDYEPGIHYSQMQMQSGVTGINAIR
IYNPIKQSKEHDPKGVFIRKWVPELKDVPDDFIHEPWAFTPNLMSSSNLSHGQDYPAPIV
DHTTATRAAKQKICEVKDGPEFRSAANSVFLKLGSRKTQSTKTRKAKPKNDGQLSLF
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
ttgatacttacaattccgcccatttctcatacgccctgtgtgatcgcacaaacaatccgc
accaaccaaaagcttaaaatgtcacaaacacacaacatagtttggttcaagcgcgatcta
agggtcaatgatcatgccccgctcctgtcggcttcacgccaagacgcgcccgtcattccc
ctgtatatcgtggagcccgatcagtggctccaaccagatgcatcgcggcgtcattggcat
tttatccatgactgtctgagcgacctaaacaaagagctgcgagagttagggcaagaattg
atcataaagattggccatgctgccgacatctttgcacagctacattcagattatcatatc
ggcacgatatatacccatgaagaaactgggaacctctggtcgtaccagcgagatattgca
gtgcaaaacctgtgcagcggtctcgatatcgaactaagaaccacccctacaaatggcata
gtgcgaaaattacgcagtcgcgacagttggtcaaacatccgaaacaagcgcatgatggaa
gccattcatccaaggcccaatgccctgccatctgttgagcgctgtcaatcagatccgctg
ccagacaaatgcgaccctatgtttggaaatctgccaattggccgcgttcaaaaaggtggc
cgaattcaggctgtaaaagatcttcggagctttcttaatcatcgttctcgcggttatctt
tcgcacatttctgcgccaaaccagtcagagttttactgttctcgcctttctggccacctc
acatttggaacgctgtctgcacgagaggttagccaatcgattgccaagcggcgaggacag
ttatctccagaagaaaataagagttttggacgaaacctgcgcgcatttgaatcgcgctta
gcctggcgttgccacttcattcaaaagattgaagatcagcccgaaattgagacgcattgc
atgcatcccgcgtttgcaaatttgcgcgaaacggcgcataatcctaagcagtttcaagcc
tgggcaaatgggaaaactggatacccctttatcgatgcctgtatgcgcaatcttaccgct
gaaggttggatcacttttcgcatgcgtgccatgctcgtaagtttcgccagctatcagctt
tggctcgattggcgtgtcacagggcctcatttggcgcgcctgtttacagattatgaaccc
ggcattcattacagccaaatgcagatgcaatccggcgtcacgggaattaatgccattcgc
atttataacccaatcaagcaatccaaagagcatgaccctaaaggtgtttttattcgcaaa
tgggtcccagagcttaaggatgttcccgatgactttattcacgaaccctgggccttcaca
ccgaaccttatgtcgtccagcaacttgagtcatgggcaggactaccccgcccccatcgtg
gatcataccaccgcgacacgcgcagcaaagcaaaagatttgtgaggtcaaggatggccca
gagtttcgatctgcggcaaattccgttttcctcaaattgggaagccgcaaaacccagtcg
accaaaacacgcaaagcaaaacctaaaaatgacggccaattgtctcttttctga
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