Planktomarina temperata: RCA23_c27900
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Entry
RCA23_c27900 CDS
T03229
Name
(GenBank) putative ribosome biogenesis GTPase RsgA
KO
K06949
ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.-
3.1.3.100
]
Organism
ptp
Planktomarina temperata
Pathway
ptp00730
Thiamine metabolism
ptp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ptp00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
RCA23_c27900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ptp03009
]
RCA23_c27900
Enzymes [BR:
ptp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.100 thiamine phosphate phosphatase
RCA23_c27900
Ribosome biogenesis [BR:
ptp03009
]
Prokaryotic type
GTPases
RCA23_c27900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RsgA_GTPase
MMR_HSR1
ABC_tran
AAA_25
GTP_EFTU
Dynamin_N
AIG1
Septin
AAA_33
VapE-like_dom
CbiA
FeoB_N
AAA_28
ATP-synt_ab
AAA_29
PduV-EutP
Motif
Other DBs
NCBI-ProteinID:
AII88298
UniProt:
A0AAN0RL67
LinkDB
All DBs
Position
2952949..2953992
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AA seq
347 aa
AA seq
DB search
MSLPTQRDAAGQLRALGWSKYFADQATSAALSKTPPVRITQVHRNTLHIQGVDLDMIIPG
LHGVTVGDWLLFDADTPRNSQLLSRKSLIKRRAPGHDRKEQLIAANLDTAFVVTSCNNDF
SLARLERYVAMAHEAGVTPVIILSKIDLTTEASDFAAQAQSISPQLSVVCLDARSPEAIE
LLRPWCQAGQTVAFLGSSGVGKSTLTNSLAGNEAIATQDVRASDDKGRHTTTGRQLHILP
SGCAVLDTPGMREIQLTDVSVGLEETFADLHALKQNCRFNDCAHKTEPGCAVQAAVASGE
VDVPRLQRWLKLVAEDAENTKFLANRKLRDRAKNKLEKSVTKYNSKK
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
ttgagcctacccacccagcgcgacgcagcaggccaactgcgcgctctgggctggtcaaag
tattttgccgatcaagccacctccgccgccctctcgaaaaccccacccgtgcggatcaca
caggtgcaccgcaacacgctgcatatccaaggcgttgatctcgacatgatcattccgggc
cttcacggcgtcacagttggagactggctcctctttgacgccgacacgccgcgcaacagt
caattgttgagccgcaaaagcttgatcaaacggcgcgcaccgggtcatgatcgcaaagaa
caactgatcgctgccaatctggacacggcttttgttgtgacctcttgtaacaatgacttc
agcctggcgcggttggaacgctatgttgccatggcccatgaggccggtgttaccccggtc
atcattttaagcaaaatcgatttgaccaccgaagccagcgactttgcagcgcaggcgcaa
agtatttcaccgcagctctcagtggtctgcctcgacgcccgtagtcccgaggccattgaa
ctcttacgcccttggtgccaagccgggcaaaccgtcgcctttctgggctcctccggtgtg
ggcaaatcgaccttgaccaattccctggccggcaatgaggccattgcgacccaagatgtc
cgcgccagcgacgacaagggccgtcacaccaccaccggacggcaattgcacattctgccc
agcggatgcgccgtcttggatacgcctgggatgcgtgaaatccaactgactgatgtctct
gtcggcttggaagagacctttgcggacctgcacgccctcaaacaaaactgccgcttcaat
gactgtgcccacaagacagaacccggctgcgccgtgcaagcggccgttgcttcaggagag
gttgatgtgccgcgcctgcaacgctggctcaaacttgtggcggaagatgccgaaaacacc
aaattcttggccaatcgcaaactgcgtgatcgggcaaaaaacaaactcgaaaaatctgtc
acaaaatacaactcaaagaaatag
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