Planktomarina temperata: RCA23_c28490
Help
Entry
RCA23_c28490 CDS
T03229
Symbol
clpB
Name
(GenBank) chaperone protein ClpB
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
ptp
Planktomarina temperata
Brite
KEGG Orthology (KO) [BR:
ptp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
ptp03110
]
RCA23_c28490 (clpB)
Chaperones and folding catalysts [BR:
ptp03110
]
Heat shock proteins
HSP100
RCA23_c28490 (clpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
AAA
AAA_5
Clp_N
AAA_22
AAA_16
Sigma54_activat
nSTAND3
ATPase_2
IstB_IS21
AAA_7
TniB
RuvB_N
AAA_24
DUF7310
AAA_25
T2SSE
HAUS2
NBD_SMAX1
Torsin
Motif
Other DBs
NCBI-ProteinID:
AII88352
UniProt:
A0AAN0RLE8
LinkDB
All DBs
Position
complement(3017549..3020158)
Genome browser
AA seq
869 aa
AA seq
DB search
MNLDKFTERSRGFIQAAQTIAQREDHARLGPEHLLKALLDDKEGLASNLIARSGGVPQRV
LEHLNLTLSKIAKVTGDAQVYVDGTTGKVLAEAEKLAQKAGDSFVPVERILMALCMVKSK
AKEALDAGAVTAQKLNGAIEDIRQGRTADSASAEDSYEALKKYAQDLTARAREGKIDPII
GREEEIRRAMQVLSRRTKNNPVLIGEPGVGKTAIAEGMALRIINGDVPESLRNKRLLALD
MGALIAGAKYRGEFEERLKAVLNEVTSAAGEILLFIDEMHTLVGAGKGDGAMDAANLIKP
ALARGELHCIGATTLDEYRKYVEKDAALARRFQPVQVEEPSVTDTISILRGIKEKYELHH
GVRIADAALVAAATLSSRYITDRFLPDKAIDLVDEAASRLRMQVDSKPEELDALDRDILQ
KQIEVEALKLEDDAASKTRLVALEKSLADLQERSSELNAQWQAERDKLASAREIKEQLDR
ARADLDIAKREGNLGKAGELSYGVIPGLEKSLAEAEAAEGHMVEEAVRPDQIAGVVERWT
GIPTSRMLEGERDKLLRMEEELHARVIGQSAAVKAVSNAVRRARAGLNDESRPLGSFLFL
GPTGVGKTELTKAVANFLFDDDAAMVRIDMSEFMEKHSVSRLIGAPPGYVGYDEGGVLTE
AVRRRPYQVVLFDEVEKAHPDVFNILLQVLDDGVLTDSQGRTVDFKQTLIVLTSNLGAQV
LSELPEGMESSEARSEVMEAVRGHFRPEFLNRLDETIIFDRLNRQDMDGIVDIQLGLLQS
RLAPREISLELDASAKTWLADEGYDPVFGARPLKRVIQSALQNQLAEMLLAGEVSDGDIV
PVTAGSEGLIVGDRVSGSNRLPPKDAVVH
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atgaatttagacaaattcaccgaacggtcgcgcggtttcattcaggcggcccaaaccatt
gcacaaagagaagatcacgcgcgccttgggccggagcatttgctcaaagcactgttggac
gacaaagaggggttggcgagcaatttgatcgcgcgatccggtggcgtgccgcagcgcgtg
ctcgaacatttgaaccttaccctgtccaaaattgccaaggttacgggtgatgcgcaggtc
tatgtcgacggcacaactggcaaggttttagctgaggcggaaaaactggcgcaaaaggcg
ggcgacagttttgtgcccgtggagcgcattttgatggcgctttgcatggtgaaatccaaa
gcgaaggaggcactcgacgccggcgccgtaacggcgcaaaagctcaatggcgcgattgaa
gacattcgtcagggtcgcaccgcggattcggccagcgccgaagacagctatgaggcgtta
aagaaatatgcccaagatttgaccgcgcgggcgcgggaagggaagattgacccgatcatt
ggccgagaagaagaaatccgccgcgccatgcaggtcctatcgcggcgcaccaagaataac
ccggtgttgatcggtgagccgggcgttgggaaaacggcgattgccgagggtatggcgctg
cgcattatcaacggtgatgtgcccgaaagcctgcgcaataagcggctcttggctttggat
atgggcgccttgattgccggggcgaagtatcgcggcgaatttgaagagcgtctcaaggcg
gtgttgaatgaggtgacatctgcggcgggcgaaatcctattgttcatcgatgagatgcac
acgcttgtcggcgcgggcaaaggcgatggtgcgatggacgcggccaatttgatcaaaccg
gctctggcccgcggcgaattgcactgcatcggagcgaccacgctggatgagtatcgcaaa
tatgtcgaaaaagacgccgcccttgctcggcgctttcaaccggtccaggtcgaagagcca
agcgtcaccgataccatctcgatcctgcgtgggatcaaggagaaatacgagttgcaccat
ggcgtgcgcatcgctgatgcggcgcttgtggcggcggcaaccctgtcaagccgctatatc
acggatcgctttctgcccgacaaggccattgacctcgtggatgaggcggccagtcgcttg
cggatgcaggtcgatagcaagcccgaagagctggacgcgctggaccgtgatatcttgcaa
aaacaaatcgaggttgaggcgctcaagctggaggatgatgcggcgtcgaaaactcggctt
gtggctttggagaaatctttggccgatctacaagagcgctccagcgagctgaacgcccaa
tggcaggcggagcgggataagctcgcctcagcgcgcgagatcaaagagcagctggaccgg
gcccgggccgatctggacatcgccaaacgtgagggcaatctcggcaaagccggtgagctg
tcctacggggtgattccggggttggaaaaaagcctagcagaggcggaagcggccgaaggt
catatggttgaggaggccgtgcgcccagatcaaatcgccggtgtggtcgagcgctggacc
gggattccgacctcgcggatgctggaaggcgagcgggataaattgctgcgcatggaggag
gagctgcatgcgcgggtgattggtcaatcggccgcggtcaaagccgtgtccaatgcggtg
cgccgggcgcgggctgggctcaatgatgaaagccgacctctggggagctttctctttttg
ggcccaaccggcgtgggtaagaccgaattgaccaaggcggtggcgaatttcttgttcgat
gacgacgctgcgatggttcggattgatatgtcagaattcatggaaaaacatagtgtgtcg
cggttgatcggcgcgcctccaggctatgttggctatgatgaggggggcgttttgaccgaa
gctgtgcgccgccggccctatcaagtggttttgtttgatgaggtggagaaggcccatccg
gatgtgttcaatattctgttgcaggttttggacgatggtgtgctcaccgacagccagggc
cgaaccgtggactttaagcaaactttaatcgtactcacctcaaatcttggggcgcaggtg
ctcagcgagctacccgaagggatggaatcttctgaggcgcggagcgaagttatggaggct
gtgcgggggcatttccgcccggaattcctcaaccgtttggacgagaccatcatctttgat
cgtctgaaccggcaggacatggacggtattgtggatatccaattgggacttttgcagagc
cgtctggcaccgcgggagatcagcttggaacttgatgcctccgccaaaacttggttggcc
gatgaagggtatgatccggtctttggtgcgcgtccgttgaagcgggtgatccaatcggcg
ttgcaaaaccaattggccgagatgcttttggccggtgaagtctcagatggtgacattgtg
cccgtcacggcgggcagtgagggcttgatcgttggagatagggtgagcggttccaaccga
ttgccacccaaagacgcggtcgtgcattaa
DBGET
integrated database retrieval system
