KEGG   Planktomarina temperata: RCA23_c28630
Entry
RCA23_c28630      CDS       T03229                                 
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
ptp  Planktomarina temperata
Brite
KEGG Orthology (KO) [BR:ptp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ptp03016]
    RCA23_c28630 (truB)
Enzymes [BR:ptp01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     RCA23_c28630 (truB)
Transfer RNA biogenesis [BR:ptp03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    RCA23_c28630 (truB)
 Prokaryotic type
    RCA23_c28630 (truB)
SSDB
Motif
Pfam: TruB_N TruB_C_2 DinB
Other DBs
NCBI-ProteinID: AII88365
UniProt: A0AAN0RLG4
LinkDB
Position
complement(3033706..3034611)
AA seq 301 aa
MGRTRKGRDISGWVIVDKPAGLTSTAVVNKIRWAFDAKKAGHAGTLDPEATGLLAVALGE
ATKTIPYITDATKAYEFTVNFGAATNTDDAEGEVIKTSDLRPDDAQIVEALQEFLGEIMQ
VPPQFSAVKIDGQRAYKLARAGEEMQIAARPLWVEELLLSDRPSADQAVLEMTCGKGGYV
RSIARDLGEVLGCYGHVAQLRRLWSGPFDLEHAVSLEQIEPFAKTSEIDQFLRPLEEGLT
DLLQGTTNAEGAAKLRNGNPAICFTAAEYGDEIWVSHEGKAQAIGRYKSGEIHPTRVILQ
E
NT seq 906 nt   +upstreamnt  +downstreamnt
atgggacgcacacgcaagggccgggacatttccggttgggtcattgttgataagcctgca
ggcctgaccagcacggctgtggtcaataaaattcgctgggcatttgatgctaaaaaagcg
ggccatgcggggactttggatcccgaggccacggggcttttggctgtggcgctgggcgag
gcgactaagaccatcccctatatcacggatgcaacgaaagcctatgaatttacagtaaac
tttggtgcggccacgaatacggatgatgcggagggtgaggtgatcaaaacctctgatctg
cgacccgatgatgcgcagattgttgaagccttacaggagtttcttggggaaatcatgcag
gtgccgccgcaattttccgctgtgaaaattgacgggcagcgggcctataaattggcgcgc
gcgggcgaagaaatgcagattgccgcccggccgctttgggtcgaagagctgttgcttagt
gatcgaccctcagccgatcaagcggtcttggaaatgacctgtggcaagggcggatatgtg
cgttcgattgcgcgggatttgggagaggttttgggctgctatggccatgtggcgcaattg
cgtcgcctgtggtcgggcccgttcgatttggaacatgcggtcagcctcgaacagatcgaa
ccctttgcaaaaacctccgagattgaccagtttctgcgtcctttagaagaaggtttgacg
gatctgttgcaaggaacaaccaatgccgaaggcgcggcaaaattgcgcaatggcaatccg
gcgatttgttttaccgccgcagagtatggcgatgaaatttgggtcagccatgagggcaaa
gcccaggcgattgggcgttataaatcaggcgaaattcatccgacgcgggtgatcttgcaa
gagtaa

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