Planktomarina temperata: RCA23_c29360
Help
Entry
RCA23_c29360 CDS
T03229
Name
(GenBank) transcriptional regulator, AraC family
Organism
ptp
Planktomarina temperata
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
AraC_binding
Cupin_2
Motif
Other DBs
NCBI-ProteinID:
AII88436
UniProt:
A0AAN0VJU4
LinkDB
All DBs
Position
complement(3108384..3109277)
Genome browser
AA seq
297 aa
AA seq
DB search
MSIIQPQIEFIDRSTRSIRYLEHGLPTDLCRWHSHEEYELHFIAETRGKAFVGDYIGDFG
PGALYLTGPNLPHNWVTDDVWAREVKIRDMLVQFNQSSFDALKMAFPEFADMQRMLTLSQ
SGIEFVGFNPTFARGHMEAIRDARGPERIVAFLRLMVRVNEHAEKKVLSVSKMVQTDGNG
KQARIGEVIDFVLNNFAEDISVERAAAIARMSPAAFSRNFQATTGHKFVEFVTRIRIGQA
CGMLYATDAQVSSICFDVGFQNLANFNRHFLKMKHMTPTEYRQTAQAELASNLGVVS
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgtctattatccagccgcaaattgagtttattgacagatccacaaggagcatccgctac
cttgagcatggcctgccgacggatttgtgccgctggcacagccatgaagaatatgagctg
catttcatcgcagaaacccgtggcaaggcctttgtgggcgattatattggtgattttgga
ccgggcgcgctctatctcaccggcccgaatttgccgcataattgggtgacggatgatgtc
tgggcgcgcgaggtcaagatccgcgacatgttggttcagttcaatcaatccagctttgat
gcattgaaaatggcctttcctgaatttgccgatatgcagcgcatgttgaccctatcgcaa
tctggcattgagtttgttgggtttaacccgactttcgcacgcggccatatggaagccatt
cgtgatgcccgggggccagagcggatcgtggcatttttgcgcctgatggtgcgggtgaac
gaacatgctgaaaagaaggtgctttcagtcagtaaaatggttcaaacggatggcaacgga
aaacaggcgcgtatcggtgaggttattgactttgtcctgaataattttgcggaagatatc
tccgttgagcgcgctgctgcaattgcgcgcatgtctcccgcggcgttttcgcgtaatttt
caagcgaccacaggtcataaattcgtcgaatttgtgactcggattagaattgggcaggct
tgcggtatgctctatgccaccgatgcacaggtctcgtcgatttgtttcgatgtgggattt
caaaacctggcgaacttcaatcgccatttcttaaagatgaagcacatgacccccaccgaa
tatcgtcaaactgcgcaagctgaactggcctccaatttaggagttgtctcatga
DBGET
integrated database retrieval system
