Planktomarina temperata: RCA23_c31040
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Entry
RCA23_c31040 CDS
T03229
Symbol
mutM
Name
(GenBank) formamidopyrimidine-DNA glycosylase MutM
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
ptp
Planktomarina temperata
Pathway
ptp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ptp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RCA23_c31040 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptp03400
]
RCA23_c31040 (mutM)
Enzymes [BR:
ptp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
RCA23_c31040 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
RCA23_c31040 (mutM)
DNA repair and recombination proteins [BR:
ptp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RCA23_c31040 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Ribosomal_S13
NFACT_N
pAdhesive_15
Motif
Other DBs
NCBI-ProteinID:
AII88604
UniProt:
A0AAN0RLW3
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All DBs
Position
3285680..3286531
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AA seq
283 aa
AA seq
DB search
MPELPEVETVRRGLQPAMQDQKIMRAEVNRPDLRWPFPPDMAQRLTGARVLRLWRRSKYI
LLDLDTQETLIVHLGMSGRMLISGQQLGEFYQDHPAPEKHDHVVFHMENDTRVTFNDARR
FGAMDLAPTADVETHKMLSSLGPEPLSNYLDDSYLFAALAGRNTPIKTALLDQRLIAGLG
NIYVCEVLFRAKISPMCKAKDLSKRQVGALVPIIRTVLEEAIEAGGSSLKDYRQTGGELG
YFQHSFQVYDRESQPCKHARCGGTIARVSQSGRSSFYCPTCQR
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaattaccagaggttgagacagtccgccgcggcttgcagccggcgatgcaggac
cagaaaatcatgcgtgcagaggtgaaccggcccgatttgcgctggccctttccgccggat
atggcgcagcgtttaactggggcgcgggttttgcggctttggcggcgttcaaaatatatt
ctgttggacttggatactcaggaaactttgattgtgcatctcggcatgtctggccgaatg
ttgatttcgggccagcaacttggggagttttaccaagaccatcccgcgccagaaaaacac
gatcatgtggtgtttcacatggaaaatgacacacgggtgaccttcaacgacgccagacgg
tttggcgcgatggatcttgcgccgaccgccgacgtcgaaacgcataagatgctctccagc
cttggaccggagccattgagcaattacttagacgacagctatttgttcgcagctttggcg
gggcgcaatacgccgataaagacggcgcttttggaccaacgactcattgcgggcctgggc
aatatttatgtctgtgaagtgctcttccgtgcgaaaatttcacctatgtgcaaggcgaag
gacctgtcaaaacgccaagtgggcgctttggtgccgatcattcggaccgtgctggaagag
gcgattgaagccggtggatctagtcttaaagattaccgtcaaacgggcggggagctcggc
tattttcaacatagttttcaggtttatgatcgagaatcgcagccctgcaaacatgcgaga
tgtggcggcacaattgcgcgggtgagccaatcgggacgttccagcttctattgtccaacc
tgtcagagatag
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