Psychroflexus torquis: P700755_000535
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Entry
P700755_000535 CDS
T02275
Name
(GenBank) 2',3'-cyclic-nucleotide 2'-phosphodiesterase
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
ptq
Psychroflexus torquis
Pathway
ptq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ptq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
P700755_000535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptq03019
]
P700755_000535
Messenger RNA biogenesis [BR:
ptq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
P700755_000535
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
KH_PNO1_2nd
HDOD
KH_KhpA-B
KH-I_KHDC4-BBP
KH_2
DUF5957
Motif
Other DBs
NCBI-ProteinID:
AFU67558
UniProt:
K4ICF7
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All DBs
Position
560245..561807
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AA seq
520 aa
AA seq
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MDITFIIIAAIAGLIIGFLISKAIDSKSATGTVKTAEKEANKLLKEAEKEGVNIKKDKIL
QAKEKFIELKSEHEKVILSRDKKINEAEKRTKDKESQISNELSKTKKLNAEVEEKLKDYS
YRTEYLEKRQEEIDTILQRKINQLEVVSGLSAEDAKAQLMESLKETAKAESMQMIQDTVE
EAKLTAQQEAKKIVINTIQRVGTEEAIDNCVSVFNLESDDVKGRIIGREGRNIRAIEAAT
GVEIIVDDTPEAIILSCFDSIRREIARLSLHKLVTDGRIHPARIEEVVKKTRKSIDEEII
DIGKRTIIDLGIHGLHPELVKMVGRMKYRSSYGQNLLQHSREVAKLCGIMASELGLNPKL
AKRAGLLHDIGKVPETETELPHAILGMQLAEKFGEKPEICNAIGAHHDEIEMTSLLSPIV
QVCDAISGARPGARRQVLDSYVKRLKDLEEIAFGFGGVKKAYAIQAGRELRVIVESEKVN
DEKASALSFEISQKIQTDMTYPGQVKITVIRETRAINIAK
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atggatataacatttattataatagcagctatagctggccttatcataggatttttaata
tcaaaagccatagatagcaaaagtgcaacagggactgtaaaaacagctgaaaaagaagcc
aataaactcttaaaagaagctgagaaagaaggggtgaatatcaaaaaagataaaatcctt
caggctaaagaaaaatttatagagcttaaatctgaacatgaaaaagtaattctttctagg
gataagaaaattaatgaagctgaaaaaagaacgaaagacaaagaatctcaaatttctaat
gagctctcaaaaactaaaaaattaaatgctgaagttgaagaaaaactcaaagattactcc
tacagaactgaatacctagagaaaaggcaagaagaaattgatacgattctacaacgtaaa
atcaatcaactagaagtggtaagtggacttagcgctgaagatgcaaaagcccaacttatg
gaatctcttaaagagaccgcaaaagctgaatcgatgcaaatgattcaagacacggtagaa
gaagctaaactcaccgctcaacaagaagccaagaaaattgtcattaacactattcaaagg
gtggggacggaagaagctatagacaactgcgtttctgtctttaaccttgagagcgacgat
gttaaaggtagaattattggtcgtgaaggaagaaatattagggcaattgaagctgcaact
ggtgtagaaataattgttgatgatactccagaagctatcattttatcttgctttgactcc
atacgtcgtgaaattgcgagactctctttacacaaattggtaactgatggtagaattcat
cctgccagaatcgaagaagtcgtaaagaaaacaagaaagtcgatagacgaagaaattata
gacatagggaaacgaactattattgatttaggcatacatggcttacacccagaactagta
aagatggtaggccgaatgaaatatagatcttcttatggtcaaaatttactccaacactct
agagaagtggctaagctttgtggcattatggcttcagaacttgggcttaacccgaaacta
gccaaacgtgctggtcttcttcatgacattggtaaagtacccgaaacagaaacagaactt
cctcacgctatattaggaatgcaattggcagaaaaatttggagagaaaccagaaatttgt
aatgccattggtgctcaccacgacgagatagaaatgacttcccttctctcccctattgta
caggtatgtgatgccataagcggagctaggccaggagctagacgccaggttctagactct
tacgtaaagcgtctaaaagatcttgaagaaattgccttcggatttggaggggttaaaaaa
gcttatgctattcaagctggtagagaattgcgggttattgtggaaagtgaaaaggtaaac
gacgaaaaagcttctgccctttcgtttgaaatttcccaaaaaattcaaaccgatatgaca
tatccaggtcaagtgaagattacggttattagggagactagagctattaatattgctaaa
taa
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