Psychroflexus torquis: P700755_001729
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Entry
P700755_001729 CDS
T02275
Name
(GenBank) exonuclease complex subunit SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
ptq
Psychroflexus torquis
Brite
KEGG Orthology (KO) [BR:
ptq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptq03400
]
P700755_001729
DNA repair and recombination proteins [BR:
ptq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
P700755_001729
Archaeal homologous recombinant proteins
P700755_001729
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
Sas-6_C_CC
SMC_N
Motif
Other DBs
NCBI-ProteinID:
AFU68582
UniProt:
K4IDD9
LinkDB
All DBs
Position
complement(1845013..1848666)
Genome browser
AA seq
1217 aa
AA seq
DB search
MKILKIELQNLNSLKSDSPIVIDFENELFKDVGLYAITGSTGAGKTTILDAITIALYHNV
PRFNNSKGTLLDVVSHGATDAFSRVTFENENTIYEAYWGMRLASKSGKLLVNPQEEVSLK
NLTSNTILSSQKRAVSEDVIRVTQLDYDQFLRSVMLAQGEFASFLTAKGPEKGRLLEQIT
GEEIYKKIGQAILDRKAKEENTLREIKSRINADDVLSEEEKIQLTTKNKELVVHILEAEK
EMNSIQTIVNWYLKSKELTHESEKLELDSRVVIIEFENHKAEFELLDLNEKAEPFKELIQ
NFNRNEKASLEKTNQLKLLEEQLRQLKPEIEQLTGLTKKQIEELDLEDKNYEAWQPKFDL
VTKLDGQLKNEADNQQKSKKLLDEVQRELKLLSDEKSECSKLSKEAENNINIDEDFVTQN
KFLTAVNQEMSSWTAALATLNGNKEALNENISTIEQKKKGVETTKSELSSNKELLDSKIA
EIKKIDREITIIKEQLAKDNLSDLLNEEKRLAEIISKWKQLKTFSVQYLKETKELERAQT
QKGKLSADIDTLKKELETKSKEILTHEKLVEKAQKIYELEKSISKYEDDRHNLFAGQPCG
LCGSKEHPFTEHLESVGVSKSLHELNEFTKELEVLKNNKSDLEKKEIKFTTSSEYLSQQI
LAFNDELKEIKFNAKQLELDTELTNSTKIEIEINQSTPKLLAMTGQINSAQQLQKQKDKL
SEDFKVQNQSIEALKTKDVSLGEKIKNLTAEIDSKKKSIDELSKTCARLENELKEKLARF
NYQLPSIEDTTSFIQGIEAKITQLNSTQKNLDELKSDLRVFKNRLIDIDKRTETSVKAYD
EHKKSITESDKKSVQLNKDRIAILPLDITVERKRNSLLLIRKKLTDKLELSKKELQKQLD
LQREKKAIKLENKKEQVVLKTVYDSLKSTLDAQISESDFESKEAIEKALLSREQKLKHTQ
NKERIKEKQLRLKTLKETNLKAISKQNKTKTFETTEEESKALSEDLKIKRDGFSAEKGEV
KEAFRKDQEIKDRNQEVYKQIEAQDAICNVWRELFKIIGNSKDAFNVYVQRLTLKHLLDL
ANVHLYKLNKRYSLKMEEVYKPKEELNFNLIDHYQTDQARLVDTSSGGEKFIISLALALG
LSDLASKNVKIDSLFIDEGFGTLDKDTLETVISTLETLQSDGKMIGIISHVENLKERIPT
QIMINKKSNGVSMVEML
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgaagatattaaaaatagaattacaaaatttaaattcattgaaatcggattctccaatc
gtaattgatttcgaaaatgaattattcaaagatgtcggattgtatgccattacgggttct
actggagcagggaaaacaacgattttagatgccattaccattgctttataccacaatgtt
ccgcgattcaataattcaaaaggaactttgttggatgtcgtgagtcatggtgcaacagac
gcgtttagtagggtgactttcgaaaatgagaataccatttacgaagcttattggggaatg
cgtttggcttcaaaatcgggaaaattgcttgtaaatccgcaagaggaggtaagtcttaaa
aaccttacgtccaataccattttatcgtcccaaaagagagcggtaagtgaagatgttatt
cgcgttacacaattggattatgatcagtttttaagatctgtaatgttggcccaaggagaa
tttgcttcgtttttaacggcaaaaggaccagaaaaaggtcgattgttagaacaaatcact
ggcgaagaaatttataagaaaattggtcaagccattctagatagaaaagccaaggaagaa
aataccttgagagaaattaaatctagaatcaacgctgatgatgttctttctgaagaagaa
aagatccaactaacaacaaaaaataaagaactcgttgttcatattttagaagcagaaaaa
gagatgaattccattcaaactattgtgaattggtatttaaaatctaaagaattaacccat
gaatctgaaaaattagaacttgattctagagtagtgatcattgaatttgaaaatcataaa
gctgaatttgaattattggatttaaatgaaaaagctgaaccattcaaagaactgattcaa
aatttcaatagaaatgaaaaagcgagtcttgaaaaaacgaatcaattaaaacttttagaa
gaacaattgaggcaactcaaacctgaaattgagcaattaacaggtttgactaaaaaacaa
attgaagaattagatttagaggacaaaaactacgaagcctggcaaccaaaatttgatttg
gttacgaaactggatggtcaattaaagaatgaagcggacaatcaacaaaagtctaaaaag
ttacttgatgaggtgcaaagagagcttaaattattgagcgatgagaaaagtgagtgttct
aaactctcaaaggaagcagaaaataatataaatatagacgaagattttgtcacacaaaac
aaattcttgacagccgtaaatcaagaaatgtctagttggacagcagcattagcgacttta
aatggaaataaagaagcgttaaatgaaaacatttcaaccattgagcagaaaaagaaggga
gttgaaactacaaaaagtgaattatcatccaataaagaattacttgattcaaaaatagct
gaaattaaaaagattgatagagaaatcactatcatcaaagagcaactagccaaagataat
ttatcggatctattgaacgaggaaaaaagacttgctgaaattatatccaaatggaagcaa
ttgaaaacgttttctgtccaatacctaaaagaaacaaaagaattagaaagagcgcaaacc
caaaagggaaaactcagtgcggatattgatacacttaaaaaagagcttgaaacaaaatct
aaggaaatccttacccacgaaaagttggtggaaaaagctcaaaagatttatgaattagaa
aaaagcatttcaaaatacgaggacgatcgtcacaatttatttgcaggtcaaccttgtgga
ttatgtggatccaaagaacatccatttactgagcatttggaatctgtaggtgtttcaaaa
tctttgcatgagctcaatgagtttacgaaagaattagaagttttaaaaaacaataaatct
gatttagaaaaaaaggagataaaattcacgacaagtagtgagtatttatcccagcagata
ttagcattcaatgatgaattaaaggagatcaaattcaatgcaaaacaattggaacttgat
acagaattgactaattcaaccaaaattgaaattgaaatcaatcaatcgacaccgaaattg
ttggcaatgactggacagattaattctgctcaacaattacaaaagcagaaagataaatta
tcagaggatttcaaagttcaaaatcaatccatcgaagcattaaaaacaaaagatgtttca
cttggagagaaaattaaaaatttgactgctgaaattgatagcaaaaaaaagtcgattgat
gaactatcgaaaacgtgcgcaagattagaaaatgagttaaaagaaaaattagcgcgtttc
aattatcaattgccatccatagaagatacaacttcatttattcaaggaattgaagcaaag
attacacaattgaattcaacccagaagaatttagatgaattaaaaagtgatttaagagta
tttaaaaacagattaattgatattgataagcgaactgaaacatcagtaaaagcttatgat
gagcataagaaatcaataacagaaagtgataagaagtcagttcaacttaataaagataga
attgccattttaccacttgatattacagtagaacgtaaacgcaatagtctgctattgatt
agaaagaaattgactgataaacttgaattgagtaaaaaagaattacagaagcagttagat
cttcaacgggaaaaaaaagctataaaactggagaacaagaaagaacaagtagttttaaaa
acggtgtatgattcactgaaatcaacactggatgctcaaatttctgaaagtgatttcgaa
tcaaaagaagcaatcgaaaaagcgttgttaagcagagaacaaaaactaaaacatacccaa
aacaaagagcgaatcaaggaaaaacagttgagattaaaaaccttaaaggaaacaaatctc
aaagctatctcaaagcaaaataaaacgaaaaccttcgaaacgacagaagaagaaagcaag
gcactttctgaagatttaaaaatcaaaagagatggtttttcagcagaaaaaggggaagta
aaagaagcgtttagaaaagaccaagaaattaaggatagaaaccaagaagtttacaaacag
attgaagcccaagatgcaatttgtaacgtttggagggaattatttaagatcatcggtaat
tccaaagatgctttcaatgtttacgttcagcgattaaccctaaaacatttactggatttg
gccaatgtgcatttgtacaaattaaacaagcggtattccttaaaaatggaagaagtttac
aagccaaaagaagaactcaatttcaatttaattgaccattaccaaaccgatcaagcgcga
ttggtcgacacgtcaagcggaggagaaaaatttatcataagtctggctttagcacttggt
ttatcagatttagccagtaaaaatgtaaaaatagactctctattcattgacgagggcttc
ggaacattagacaaagatacccttgaaacagtaatttcaacattggaaactttgcagtcg
gatggaaaaatgataggaatcatttctcacgttgaaaatttgaaggagagaataccaaca
cagattatgattaacaagaagagtaatggggtgagtatggttgagatgttgtaa
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