Psychroflexus torquis: P700755_002582
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Entry
P700755_002582 CDS
T02275
Name
(GenBank) DNA-directed RNA polymerase beta' subunit RpoC
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
ptq
Psychroflexus torquis
Pathway
ptq03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ptq00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
P700755_002582
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptq03021
]
P700755_002582
03400 DNA repair and recombination proteins [BR:
ptq03400
]
P700755_002582
Enzymes [BR:
ptq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
P700755_002582
Transcription machinery [BR:
ptq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
P700755_002582
DNA repair and recombination proteins [BR:
ptq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
P700755_002582
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
RPOC_hybrid
Peptidase_M23
RnfC_N
Biotin_lipoyl
Motif
Other DBs
NCBI-ProteinID:
AFU69330
UniProt:
K4IV25
LinkDB
All DBs
Position
2771802..2776109
Genome browser
AA seq
1435 aa
AA seq
DB search
MTRNNDKNTQKRFNKISIGLSSPERILGESRGEVLKPETINYRTHKPERDGLFCERIFGP
VKDYECACGKYKRIRYKGIVCDRCGVEVTEKKVRRDRVGHINLVVPVAHIWYFRSLPNKI
GYLLGIPSKKLDMIIYYERYVVVQPGDAKNEEGESLKKMDFLTEEEYLNILEKIPQENQY
LDDDDPNKFIAKMGAECLLEILKRLDLNELSYDLRHKANNETSKQRKTEALKRLQVVEAL
RDSTKNRENNPEWMIMKVIPVTPPELRPLVPLDGGRFATSDLNDLYRRVIIRNNRLKRLM
EIKAPEVILRNEKRMLQESVDSLFDNTRKSSAVKTDSNRPLKSLSDSLKGKQGRFRQNLL
GKRVDYSARSVIVVGPEMKMFECGLPKDMAAELYKPFVIRKLIERGIVKTVKSAKKIIDK
KEPVVWDILENVLKGHPVLLNRAPTLHRLGIQAFQPKLIEGKAIQLHPLVCTAFNADFDG
DQMAVHLPLGPEAILEAQLLMLASHSILNPANGSPITVPSQDMVLGLYYMTKPRSSTPEH
KVKGEGLRFYSDEEVNIAYNEKQVELNALITIRTNDVDENGDIVKKNIETTVGRVLFNQT
IPDSVGFINDVMTKKALRDVIARVLKKTSVPETAEFLDEIKSLGYNFAFKGGLSFSLGDI
IIPAEKQSMIDDANEQVEGVIGNYNMGLITNNERYNQVIDIWTATNANLTELAMKRIRED
QQGFNSVYMMLDSGARGSKEQIRQLTGMRGLMAKPKKSTSAGGEIIENPILSNFKEGLSI
LEYFISTHGARKGLADTALKTADAGYLTRRLVDVSQDVIVREEDCGTLRGIEVFALKKND
EVVESLGERIVGRTALNDIIDPISQDLLVESGDEIHEDAADKIEVSALNSVEVRSPLTCE
AKQGICVKCYGRNLSTNKTVQRGEAVGVVAAQSIGEPGTQLTLRTFHVGGIAGNISEENK
LESKFDGVAEIEDLKTVEGKNNDGKKTDIVISRTSEIKVIDKKSGIALSTNVIPYGSELL
VSPGDKIKKGDVICKWDPYNGVIISEFSGKIEFENITQGQTFDVESDEQTGFQEKVIIES
KNKRKIPTLHIKNSGGEIMRSYNLPVGAHLMVDDDEEIKIGKILVKIPRKSSKTGDITGG
LPRLTELFEARNPSNPAVVSEIDGVVSFGKIKRGNREIIIESKLGVIKKYLVKLSNQILV
QENDYVKAGMPLSDGSVTPEDILKIKGPSAVQQYLVNEVQEVYRLQGVQINDKHFEVVVR
QMMRKVRIQDSGDTIFLENQLVHKEDFIEENDNIFGKKIIEEAGDSVNLKPGQIVTIREL
RDENSILKREDKQLVTARDAESATAAPILQGITRASLQTKSFISAASFQETTKVLNEAAV
SGKVDYLEGLKENVIVGHRIPAGTGLREFDDIIVGSKEELANMMEKKQQVNVNFN
NT seq
4308 nt
NT seq
+upstream
nt +downstream
nt
atgacaagaaataatgataagaatacacaaaagagatttaataaaatctctataggttta
tcttctccagagagaattctaggtgaatctcgaggtgaagttttaaaacctgaaactatt
aactacagaacacacaagccggaaagagatggattgttttgtgaacgaatttttggccct
gtcaaagattatgaatgtgcttgtggaaaatacaaaagaatacgctacaaaggaattgtt
tgcgaccgttgtggagttgaagtaaccgaaaagaaagtaagaagagaccgtgttggacat
atcaacttagtcgttcctgttgctcatatttggtactttagatcgttacctaataaaata
ggttaccttcttgggattccttccaagaaactggacatgattatttactacgagcgttat
gtagtcgttcagccaggggatgctaaaaatgaagagggagagtcactcaaaaaaatggat
ttcttaacggaagaagaatatttgaatattcttgaaaaaattccacaagagaaccaatat
ttagacgacgacgatccaaacaaattcatcgccaaaatgggtgctgagtgtcttttggaa
attttaaagcgcttagatcttaatgaactgtcttacgacctaagacataaagctaacaat
gaaacttctaagcaaagaaaaactgaagctttaaagcgtctacaagttgttgaagcttta
agagattctacaaaaaatagagagaataatcctgagtggatgatcatgaaagtgatccct
gtaactccaccagaattaagaccacttgtgccacttgatggtggacgttttgcgacctca
gatttaaatgacttataccgtagagtgattattagaaacaatcgtttaaagcgattgatg
gaaataaaggctcctgaagttattttgagaaacgaaaagcgtatgctgcaggaatctgta
gattctttgtttgataatacaaggaaatcttcagcggttaaaactgattctaacagacct
ctgaaatcgctttcagattctttaaaaggaaagcaaggacgtttcagacaaaacttactt
ggtaaacgtgtggattattcagcacgttcggttattgttgttggtcctgaaatgaaaatg
tttgaatgtggattgccaaaagatatggctgcagaactttacaagccctttgttatcaga
aaactgattgaaagaggaattgttaagactgtaaaatcggctaagaaaataattgacaaa
aaagaaccagtagtttgggatatccttgaaaatgtacttaagggtcatcctgtattgctt
aaccgtgcgccaacgcttcacaggcttggtatacaagcttttcaacctaagttgattgaa
ggtaaggcgatacaactgcacccattggtttgtactgcatttaatgccgattttgatggt
gatcaaatggcggttcatttaccacttggtccagaagctattttggaagctcaactttta
atgttggcctctcatagtattttgaatcctgcaaatggttctcctattactgttccttct
caggatatggtacttggattatactatatgactaagccaagatcttctactccagaacat
aaagtgaaaggagaaggccttaggttttattctgatgaagaagttaacattgcttacaat
gaaaagcaagttgaattaaatgcattaattacaattagaactaacgatgttgatgaaaat
ggagatatcgttaagaaaaatatagaaacgacagtaggacgggtcttgtttaaccaaact
atccctgatagtgtaggttttatcaacgatgtaatgacgaagaaagcattacgtgatgtt
atagcgagagtgcttaagaaaacatctgttcctgaaactgctgaattcttagatgaaatt
aaaagtctagggtacaatttcgcctttaaaggtggattgtctttctctcttggtgatatt
attatcccagcagaaaagcaatctatgattgatgatgcaaatgagcaagtagaaggtgtt
ataggaaactataacatgggtcttatcacaaacaatgaacgttacaaccaagttattgat
atatggactgctaccaatgcaaatctaacagaactcgcgatgaagcgtatccgtgaagat
cagcaaggtttcaactctgtatatatgatgcttgattctggtgcaaggggttctaaggag
caaattcgccagttaacaggtatgcgtggtttgatggctaagcctaaaaaatctacatct
gcaggtggagaaattattgaaaatcctattttatctaactttaaagaaggtctttcaatt
ttagaatactttatctctactcacggtgctcgtaaaggtcttgccgatacggctcttaaa
actgccgatgctggttacttaacccgtagactggtagatgtttctcaagatgtaattgta
agagaagaagactgtggaaccttaagaggtattgaagtctttgcattgaagaaaaatgat
gaagttgtagaaagtttaggagaacgtatcgttggtagaacggctctgaacgatattata
gatcctatttctcaagatttacttgtagagtctggagatgaaatccatgaagatgctgca
gataaaattgaagtctctgctttaaactcagttgaagttcgctctccattaacttgtgag
gctaaacaaggaatttgtgtgaagtgttatggtagaaacctttcaaccaataagacagtc
cagcgaggtgaagctgtaggagttgtcgctgcccaatctataggtgagccaggtactcag
ttaaccctaagaactttccacgttggaggtattgcaggtaacatttcagaagaaaacaaa
ttggaatctaagtttgatggtgttgcagaaattgaagacttaaaaacagttgaaggaaaa
aataacgatggcaagaaaacagacattgttatttcaagaacttcagaaataaaagtcatc
gataaaaaatctggaattgctttaagtacaaatgttatcccttatggttctgaacttctg
gtaagtcctggagataaaatcaaaaaaggagatgttatttgtaaatgggatccttataat
ggtgtaattatttcagaattctctggtaaaattgaatttgaaaatatcactcaaggtcag
actttcgatgttgaaagtgatgagcaaactggtttccaagaaaaagtaattattgaatct
aagaataagcgtaagattcctacacttcacatcaaaaatagcggtggtgaaattatgaga
tcttataacttacctgttggagctcacttaatggtggatgatgacgaagaaatcaaaatc
ggaaagatcttggttaaaattcctagaaaatcatcaaaaactggtgatattacggggggt
cttccaagactaacagaattgtttgaagcaagaaatccttcaaatcctgctgtagtaagt
gaaattgatggtgttgtttcttttggaaaaattaaaagaggtaaccgtgaaattatcata
gagtctaaacttggtgtgattaaaaaatacttggttaaactttctaatcagatcttagta
caagaaaatgattatgtaaaagcaggtatgccattatccgatggttctgttactccagaa
gatatcttgaaaatcaaaggtcctagcgctgtgcaacaatacctagtgaacgaggtgcag
gaggtctatagattacaaggagtgcagatcaacgataaacactttgaagttgttgtaaga
cagatgatgagaaaagttaggattcaagactctggagatacgatattcttagaaaaccaa
ttggtgcataaagaagactttatcgaagagaacgataacatttttggtaagaaaattata
gaggaggcaggtgacagtgtgaacttaaaacctggtcaaattgtcacgatccgtgaatta
agagatgaaaattctatcttgaaacgcgaggataagcaattggttactgcgcgagacgca
gagtctgctactgccgctccaatcttacaaggaattacaagagcatctctacaaaccaaa
tcattcatttcggctgcttctttccaagaaacaaccaaagtattaaacgaagctgctgta
agtggaaaagtagattacttagaaggattgaaagaaaatgtaattgtaggacatagaatt
cctgcaggtacaggtttaagagagtttgacgacatcatagttggttctaaagaagaattg
gctaatatgatggagaaaaaacaacaagtaaatgtaaactttaattaa
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integrated database retrieval system
