Psychroflexus torquis: P700755_003457
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Entry
P700755_003457 CDS
T02275
Name
(GenBank) ATP-dependent RNA helicase DbpA-like protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
ptq
Psychroflexus torquis
Pathway
ptq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ptq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
P700755_003457
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptq03019
]
P700755_003457
03009 Ribosome biogenesis [BR:
ptq03009
]
P700755_003457
Enzymes [BR:
ptq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
P700755_003457
Messenger RNA biogenesis [BR:
ptq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
P700755_003457
Ribosome biogenesis [BR:
ptq03009
]
Prokaryotic type
rRNA helicases
P700755_003457
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
AAA_22
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AFU70084
UniProt:
K4IIC4
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All DBs
Position
complement(3651729..3653489)
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AA seq
586 aa
AA seq
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MTTFESLGLSPEILRAIEDLGFESPSEVQEQTIPVLLEESTDMVALAQTGTGKTAAFGFP
LIQNIDLNSKKTQGLILSPTRELCMQITNELKQYSKYYQNLSTVAVYGGASITDQARQIK
KGAQIIVATPGRMKDMIQRNIIDISNISICILDEADEMLNMGFFEDIKEILSHSSDQKNT
WLFSATMPKEVSIIAKKFMKNPKEITVGQKNISTKSVSHEYFIVGGRDRYSAVKRVVDAN
PDIYAVVFCRTKRDAQKVAEKLIEDGYSASALHGDLSQAQRDMVMNSFRRKQIQMLVATD
VAARGIDVDDITHVINYQLPDEIEIYTHRSGRTGRAGKEGKSLVIVTKSEVRKIKQVERM
IGQKFTQEELPSGDEICKRQLFHLADEIKKTEINHAIDPFIPNLEAEFEELSKEDIIKKF
FSVEFSRFHNYYKNAPKVVQHSADESYSSGKDYGDETRFFINIGEKDGFDWMSMKDFLKD
QLELDRDGVAKVDVKNTFSFFNVATDDVEKVEGVFESFMLKGRHVNVEITKDQKSGGGGG
GRKGGDKSRDRKPRKRFDKNNSSDFKGKKPGGSNVKSSFERRRKKN
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgactacatttgaatcattaggcttaagccctgaaatcttgagagcaatcgaagattta
ggatttgagtccccgagtgaagtacaggaacaaacaattcctgttttactcgaagagtca
accgatatggttgcacttgcccagacaggtacaggaaaaacagccgcattcggttttcct
ctcattcagaacattgacctcaattccaaaaaaacacaaggtttaattttgtctccaact
cgtgaattgtgtatgcaaatcaccaacgagctaaaacagtattcaaaatactaccaaaac
ctaagtactgttgctgtatatggaggcgcgagcatcactgatcaagccagacaaattaaa
aaaggggcacaaattattgtagcgactcctggacgtatgaaagatatgatccagagaaac
attattgatatttcaaatatcagtatatgtatcttggatgaggcggatgaaatgttgaac
atgggtttctttgaagatataaaagaaattctgtcccattcttccgatcaaaaaaacaca
tggttatttagtgcaacgatgccaaaagaggtatcgattatcgctaaaaaattcatgaaa
aatccaaaggagatcactgttggccagaaaaatatctctacaaaatctgtaagtcacgag
tattttatcgtgggtggtagagatcgttatagcgcggtaaaacgtgtggttgatgccaat
ccagacatctatgctgttgtcttttgtagaaccaaaagagacgctcaaaaagtggctgaa
aaactcatagaagatgggtacagcgcttctgctttacatggagatttgagccaggctcaa
agagatatggtaatgaacagttttagaagaaagcaaatccaaatgttagtagcaacagat
gttgctgctcgtggaattgatgtagacgatatcacacacgtgatcaattaccaactccct
gacgaaattgaaatttacactcaccgaagtggaagaactggtcgtgctggtaaagaaggt
aaatctttagtcattgtcactaaaagtgaagtgagaaagattaagcaagttgaaagaatg
atcggacagaaattcactcaagaggaattaccttctggagatgagatctgtaaacgtcaa
ttatttcatttggcagacgagattaaaaagactgagatcaatcatgcaatagatcctttt
atcccaaatctagaagctgaatttgaagaactaagcaaggaagatattattaaaaaattc
ttttctgttgaattctcaagatttcataattattataagaatgctccaaaagtagttcaa
cactctgctgatgagtcttattcctcaggaaaagattacggagatgaaactcgatttttc
ataaatattggtgagaaagatggtttcgactggatgtcgatgaaggacttcctaaaggat
cagttggaactagatcgtgatggagttgctaaggttgatgttaaaaacaccttttcattc
ttcaatgttgcgacagatgatgttgaaaaagtggagggcgtttttgaaagctttatgtta
aaaggtagacatgtaaatgttgagatcaccaaagatcaaaagagcggcggtggtggcggt
ggtagaaaaggtggcgataagtcacgagatcgcaaacctagaaaacgatttgacaagaat
aattcttccgattttaaaggtaaaaaaccaggaggatcaaacgttaagagttcttttgaa
agaagacgaaaaaagaactaa
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