Psychroflexus torquis: P700755_003901
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Entry
P700755_003901 CDS
T02275
Name
(GenBank) excinuclease ABC subunit A UvrA
KO
K03701
excinuclease ABC subunit A
Organism
ptq
Psychroflexus torquis
Pathway
ptq03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ptq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
P700755_003901
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptq03400
]
P700755_003901
DNA repair and recombination proteins [BR:
ptq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
P700755_003901
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
P700755_003901
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
AAA_16
RsgA_GTPase
nSTAND1
DnaJ_CXXCXGXG
AAA_25
nSTAND3
Viral_helicase1
AAA_33
AAA_22
cobW
T2SSE
Motif
Other DBs
NCBI-ProteinID:
AFU70474
UniProt:
K4IJH2
LinkDB
All DBs
Position
4151114..4153951
Genome browser
AA seq
945 aa
AA seq
DB search
MEKKEEFIEVLGARVHNLKNIDVKIPRNKLVVITGLSGSGKSSLAFDTIYAEGQRRYIET
FSAYARQFLGGLERPDVDKIDGLSPVIAIEQKTTSKSPRSTVGTITEIYDFLRLLYARVG
TAYSYKTGEKMVSFTDEQIQNNIVEGFKDKRVNILSPVIRSRKGHYRELFEQIAKQGFLK
VRIDGEIKDIEKGMKVDRYKIHDIEVVVDRIKIDDDINSSKRLSESIATAMKQGNNVMMI
LEHGKEKPKFFSRNLMCPTSGISYPNPEPNNFSFNSPKGACPKCNGLGEVFEINLDRIIP
NPNLSIREGGLEPHGKEKKNNWVFKQLKAIAEHFDFDLKDPIETLPEEALDIILHGGKAR
FEKYSDTSKVNKTFSYNFEGVAKFIEDTFNQKESSASLKRWAKKYMDKKPCETCQGSRLQ
KESLYYKIDDKNIADIVNMDVDELVAFFKDLLSRLEKSEKKIAEEIIKEIKTRLSFLEDV
GLNYLNLNRGSKTLSGGEAQRIRLATQIGSQLVGVLYILDEPSIGLHQRDNEKLINSLVS
LRDLGNSIIVVEHDKDMIERADHVIDIGPHAGKNGGQIISEGTPKTILTHYTLTADYLSG
KKKIEIPEKRRKGNGKHLHLMNATGNNLKDVSIKIPLGKLIVVTGVSGSGKSTLINDTLY
PVLNNYFFNGKMEALPHKTVRGLKHLDKVIDINQSAIGRTPRSNPATYTGVFGEIRNLFA
KTPEALIRGYKPGRFSFNVKGGRCETCRGGGLKVIEMNFLPDVYVECETCMGKRFNRETL
EIRFKGKSISDILQMTIDESTDFFEPIPKIYRKLKTIKDVGLGYITLGQQSTTLSGGEAQ
RIKLASELSKISTGNTFYILDEPTTGLHFEDIKVLMEVLQKLVDKGNSVLIIEHNMDVIK
LADYIFDIGYEGGKKGGQLVAKGTPEQVAKDKKSYTAEFLRKELN
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaaaagaagagtttattgaagtccttggggctagagttcataatttaaaaaac
atcgatgtcaaaatacctagaaataagcttgtggtcatcacaggcttatctggttctggg
aaatcttcattggccttcgatactatctacgcagaaggtcaacgccggtatatagagact
ttttctgcttatgctaggcaatttttgggtggattggaacgtccagatgttgataaaatt
gatggcttatcacctgttattgctatcgaacaaaaaaccacgtcaaaaagtccaagaagt
actgtaggaaccatcacagaaatttacgatttcctcagacttttgtatgcacgagtgggt
acagcttacagttacaagactggtgaaaaaatggtaagcttcaccgatgaacaaattcag
aataacatagtagaaggctttaaggataagcgagtaaatattctctctccagttatacgc
tctcgtaaaggccattatagagaattatttgagcaaattgctaagcaaggttttctaaaa
gtaagaatcgatggagaaataaaagacatcgaaaaaggcatgaaggtggataggtataaa
atccacgatatagaggttgtcgtagatcgaataaaaatcgatgatgatatcaactctagc
aaacgtttgagcgaaagtattgctacagcgatgaagcaaggcaataatgtgatgatgatt
ctagaacatggcaaggaaaagcctaaattctttagccgtaatttaatgtgccccacgtct
ggtatttcttaccccaatccagagcctaataatttctcattcaattctccaaaaggcgct
tgtcctaaatgcaatggattaggtgaggtttttgaaattaatctagatcgtatcattcca
aatcctaatctctcaattagagaaggtggcctcgagcctcatggtaaggagaaaaaaaac
aactgggttttcaaacagctaaaagccattgcagaacactttgattttgatttaaaagat
ccaattgaaaccctacctgaagaagctttggatattatcctacacggaggaaaagcaaga
tttgaaaaatatagcgatacctctaaagttaataaaacattcagttataattttgaaggt
gttgccaagtttattgaagatacttttaatcaaaaagaatcttcagcatcgctaaaacgt
tgggccaaaaaatacatggataaaaagccctgtgaaacctgtcaaggaagtagactacaa
aaagaatctttatactacaaaatcgacgataaaaatatcgcagatattgtgaatatggat
gtagacgaattggttgctttttttaaggatttactatctagactcgagaaaagcgaaaaa
aaaatagcggaagaaatcatcaaagaaataaaaactagactttcgtttttggaagatgtt
gggctaaactatctaaacttaaacagaggctccaaaaccctttctggaggagaagcccaa
aggataagacttgccacgcaaataggatctcaacttgtaggggttctttatattttggac
gaacctagtattggtttacaccaacgtgacaacgaaaaacttatcaattctttagtctcg
cttcgagatttaggaaattctataattgtcgtagagcatgataaagatatgatagagcgc
gcagatcatgtaatagatattggtcctcatgctggtaaaaatggaggacagattattagc
gaaggcactccaaaaacaattctcactcactatacacttacagcagattacctttctgga
aaaaagaaaattgaaattccggaaaagagaagaaaaggcaatggaaagcacctccacctt
atgaatgcgactggtaataatcttaaagatgtctctatcaaaattcctttaggaaagctt
attgtagtgacaggagtatctggaagtggaaaatccacacttattaatgatactttatat
ccagtgttaaataactatttttttaatggtaagatggaggctttacctcataaaacagtg
agaggcttaaaacatctagacaaagtcattgatattaaccagtccgctattggaagaaca
ccacgctccaatcctgcaacttacacaggcgtttttggagaaatacgaaacttatttgct
aaaactccagaggccttaattcgaggctacaagcctggaaggtttagtttcaatgtaaaa
ggtggtcggtgtgaaacgtgtagaggaggaggcttaaaagtcatagaaatgaactttttg
ccagatgtatacgtggaatgtgaaacatgcatgggcaaacggtttaacagagaaactttg
gaaatacgatttaaaggaaaatctataagtgatatcctgcaaatgactattgatgaatcg
actgatttctttgagcctatcccaaaaatctatcgtaaactgaaaacaataaaagacgta
ggtttaggttatatcacattaggtcaacaaagtaccaccttatctggaggagaggcacaa
cgtataaaactagcatcagaactttccaaaatcagcactggaaatacgttttatatattg
gacgaacctaccacaggacttcacttcgaagatattaaagttcttatggaagttttacaa
aaactcgtagataaaggaaattcggtattgattattgaacataatatggatgtgataaag
ctagcagattatatctttgatatcggttatgagggaggaaaaaaaggaggacaactcgtt
gcgaaaggaactccagaacaagttgctaaagacaaaaaaagctatacagcagaattttta
agaaaagaactcaactaa
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