Puccinia triticina (wheat leaf rust): PtA15_10A18
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Entry
PtA15_10A18 CDS
T09180
Name
(RefSeq) uncharacterized protein
KO
K11292
transcription elongation factor SPT6
Organism
ptrc
Puccinia triticina (wheat leaf rust)
Brite
KEGG Orthology (KO) [BR:
ptrc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptrc03021
]
PtA15_10A18
03036 Chromosome and associated proteins [BR:
ptrc03036
]
PtA15_10A18
Transcription machinery [BR:
ptrc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
PtA15_10A18
Chromosome and associated proteins [BR:
ptrc03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
PtA15_10A18
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
HTH_44
Spt6_S1
Tex_central_region
SPT6_acidic
HHH_9
S1
HHH_3
SH2
Baculo_p24
Motif
Other DBs
NCBI-GeneID:
77801225
NCBI-ProteinID:
XP_053024154
UniProt:
A0ABY7CVD4
LinkDB
All DBs
Position
10A:complement(join(205037..205068,205337..205631,205710..205790,205860..205990,206074..206250,206329..207316,207396..208148,208223..208555,208626..208771,208863..210258,210348..210442,210527..210652,210723..210864))
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AA seq
1564 aa
AA seq
DB search
MEPTENDVEQNEEQTQVVEEDEGAQNGLEDSSEEEEEGSEEERAVREGFIADEDEEDAES
EDEDRSSRKRKRKHRHRHKHSERKKRHRSVANDDDEDNDLDEDDLELLAENTGVPTQRKA
KRRLRRAGSVASDNIDQDVEDDLHRIFDDEDDGFETSARPRDTLGGDDLDDFIEEDEFPE
DEPSNIPSRANKRKDKHVRSSQGNTGRQKQAGRLMGDLAPDVSDITKESWDEVIEVFGNG
DDYGWALEIEENAYLNLDGDPDLEGEDIQAKNPAVQLKDIFEPSELKERMMTEADEAIRL
LDIPERTQLASAGLTNINSTEAVLGPEELERAAEWVAPRISQRCTESFIQLDRHGFPPLM
KEHFILAVKEVLDFFLTKYFEVPFVFMRRQDYITYHDPKAHDAQSRDIQFLTREELWKAH
TLALKYVALLERKKGLKRLFDKLGTEDDYFEECFSGIQSVEEVADLMQWLTLKYGHRLRE
AQADVREDADAMADLDAEGLSGPAIEAKKAVRYKKALRESRYERAKSTNINHLSKEISIS
ARELTTNFLNHEKRHQKDNPPLQPLSYAETFCDPDTEFEEPKKVIEAAKFILSTDIGRDP
LLKKHVRQLFRDHGVVTVTPTESGMHKINELHPYFVFKYLCQKPFSALKHCSQYLQIMAA
EEELLVNVQVHLSPQTDRDIKTELLSMFKSDDPSDESAQWNELREEILMYAIEHMLLPDA
ARWAKNYLKDEAEEFVAQKCADELEFRADVAPFRPNHLFDGEVPSVVAVSNGAGDPKRDS
VFVIFLDRAGRFRDHMKLDNLRDPDPRQAFADLLKTRTPDVIVVGGFSASTYRLLGDVKM
VSGELSERMKSEMQNAQGQLTTEAASKLNFPVIVARDDTARLNQQGKRAEEEFGELPPLG
RYCVALARYVQSPLNEYAAAASDLTAISFHADQQFLPKETLQLYLERALVNIVNAVGVDI
NRAVNDPYYQCLLQYVCGLGPRKAQKLIKSINASPKIEGTLSLRNELITENLVTKNIFYN
CAGFLRINQDDLRPNRTIDPDILDDTRIHPEDYDVARKMAADAQELDEEDLTGQPPSQVV
SDLLASDNGNGAAKLDDLNLDDFAEELCRLMQQKKRLTLYQIRSELQNPYQETRAQFEPL
TPDQMFDLWTGENEATLSQGTLIPVKITRVRDRGLAVRLDSGIEGFIDQNYMVDEGTPDM
SKFSVGSTTQAVVVEIHKDRFSVELNSQPHYVAANSGGRKKVETDPYFDMSQMEIDKDRV
ETKKKTGSRRTQRVIKHPNFHNFNAGQAEQHLANLQRGDCVIRPSSRGTDHLAVTWKVDT
GIYQHIDVLELDKPNEFSLGRILKIGGRYSYSDLDELIVSHVRAMARKVEEMIQHEKYKG
SSDDMSNFLKTYLMANPDRSTYAFCIDKEVAGNFLIGFKANKNSPMQTWNVKVSPGAYEL
HGTQAGDMLSLCNAFKTQYTARAAAATAAGHGGRSEIYGRQTPSLAPNGRTPIHGGRTPM
LTNRTPLVGSRTPLVTPRYPGSTPQYPPLPAAGQSYQQPAPPGYSAPPPQPPAQDWAPPR
QGYV
NT seq
4695 nt
NT seq
+upstream
nt +downstream
nt
atggagcctacggaaaacgatgttgagcaaaacgaggaacaaacccaagtcgtggaggag
gatgaaggcgcgcagaacggtctagaagatagcagcgaagaagaagaggaggggagtgaa
gaagagagggcagtacgcgaaggatttattgccgatgaagacgaagaagacgcggagtca
gaggatgaggatcgctcatcacgaaaaagaaaacgcaaacatcgccatcgacacaagcat
tcagaacgcaagaagagacatcgatctgttgccaacgatgacgatgaagacaatgacctg
gatgaagatgatttagaattgctggctgagaacactggagttcctacgcaaaggaaggct
aagagacgattgcggcgcgcggggtcggttgcttctgataacatcgatcaagatgttgaa
gacgatttacaccggattttcgatgacgaagatgacggattcgaaacttctgctcgccct
cgtgacacgcttggtggagatgatctggatgatttcattgaagaggacgaattcccagag
gacgagccttcaaacataccatcaagagccaacaagaggaaagataagcatgtacgctct
tcgcaaggcaacaccgggcgccaaaaacaggccggtcgcttgatgggcgatctggctccc
gatgtctccgatatcacaaaagagtcctgggatgaagtcattgaagttttcggtaacggc
gatgattacggttgggcattggaaattgaggagaatgcgtatttgaatttagatggtgac
ccagatctagagggcgaggacatccaagctaaaaacccggccgttcaactgaaagatatt
tttgaaccgagtgaactcaaggagcgtatgatgaccgaggccgatgaagcaattagactt
ctcgatatacctgaacgcactcaactcgcttctgctggcctaacaaatatcaactctacg
gaggcagttcttggaccagaagagctggagcgcgccgccgaatgggttgcgccacggatt
tcgcaacgatgtactgaatctttcatccagctcgatcgacacggatttccgcccctaatg
aaggaacatttcatactcgccgtaaaggaagttttggatttcttccttaccaaatacttt
gaagtccctttcgttttcatgcgccggcaagattacatcacctaccatgaccccaaagct
catgatgctcaaagtcgagatatacagtttctaacccgtgaagaactctggaaagctcat
acactcgccctgaaatatgttgctctgcttgagcgtaaaaagggtctcaagcgactgttc
gacaaactggggactgaagacgattacttcgaagaatgcttttcaggcatccaatctgtt
gaagaagttgccgacctgatgcagtggctcaccctaaaatatggacatcgattgcgtgaa
gcacaagccgatgtccgcgaggacgctgatgccatggccgacctcgatgctgagggtctc
agtggacctgccatcgaggccaaaaaggccgttaggtacaaaaaggccctgcgcgaaagt
cgatacgaacgtgccaagagtacaaatatcaatcacctatccaaagaaatcagcatctct
gctcgtgaactaaccaccaattttctgaatcacgagaaaagacatcaaaaggacaaccct
cccttgcaaccactctcgtatgctgaaacattctgcgatccagatactgagtttgaagag
cctaaaaaggtgatcgaagcggctaaatttattctcagcaccgacattggacgtgacccg
ttactcaaaaagcatgtccggcagttatttcgagatcacggagtagtcactgtcacgcca
actgaaagtggtatgcacaagatcaacgaacttcatccttatttcgtcttcaaatatctc
tgtcagaagcccttctcggctctcaagcactgctctcaatatcttcagatcatggccgct
gaagaagagctgctagtcaacgtgcaagtgcacctcagccctcaaactgatcgcgacatc
aaaactgagctactcagcatgttcaagtctgatgatccttctgacgaatccgcccaatgg
aacgaacttcgggaagagattttgatgtatgcgattgagcatatgctactaccagatgca
gcccgttgggctaaaaactacttgaaggatgaagccgaggagttcgtggcacagaaatgc
gctgatgaactggagtttcgcgcagatgtagctcccttccgtccaaaccatctcttcgac
ggcgaagttccctcggtagttgctgtttcgaacggagcaggtgatccaaagcgtgattct
gtttttgtgatcttcttggaccgagcagggcgatttcgggatcacatgaagctcgataac
ctgcgtgatcctgatccacgccaggcctttgcagatttactgaagactcgtacaccagac
gtcattgtcgttggcggattcagcgcatcgacttacagactattgggagacgtcaagatg
gtttcgggtgaattatctgaacggatgaaatccgaaatgcaaaacgcacaaggtcaatta
accactgaggccgccagtaagttgaattttccggttatcgtcgcccgagacgataccgca
agattaaaccagcaaggtaaacgagccgaagaggaatttggagagctaccacctcttgga
agatattgcgtcgccttggcccgatacgttcagagtccgttaaatgagtatgctgctgct
gcatcggatttgactgcgatatcttttcacgccgatcaacaatttctaccgaaggagact
cttcagttgtacttggaacgagctctggtcaacatcgtcaacgctgtcggtgttgacatt
aaccgcgctgtaaacgacccttattaccaatgtctcctccagtatgtgtgtgggcttggg
ccacgaaaagctcagaaattgatcaagtccatcaacgccagcccaaaaattgaaggtacc
ctcagcttgcggaatgaattgattactgagaacttggttaccaaaaacattttttacaat
tgtgccggattcttgcgaatcaatcaggatgatcttcgcccaaatcggacgatcgatccg
gatatcttagacgatacgagaatacatcctgaagattacgatgttgcacggaagatggct
gctgatgctcaagagctggatgaagaggatcttaccggacagccgccgtcacaagtcgtc
agcgatctgttggccagtgacaatggcaatggagcggcgaagttggatgatctgaatcta
gatgattttgctgaagagctttgtcgtttgatgcaacagaagaaaagattgacgctctat
cagattaggtctgagttacaaaatccttaccaagaaacgcgagctcagtttgagcccttg
acgcccgatcagatgtttgacctctggactggcgaaaatgaagcgacactttctcaaggc
acactcataccggttaaaatcacaagagtccgtgatcgtggtttggccgtccggctggat
tccggaatcgagggctttatcgaccagaactacatggtggacgaagggacacccgatatg
agcaaattctcagtgggttcgacaacacaggcggtagttgtcgaaatccacaaggaccgt
ttctcggtggagctcaattctcaaccccactacgtggccgccaactcgggaggtcgaaaa
aaagtggaaaccgatccatattttgatatgtctcagatggaaatagataaagaccgagtg
gagacaaagaagaagacgggcagtcgccggactcagagagttatcaagcatcccaacttt
cacaacttcaatgctggacaggccgagcaacatcttgcaaacttacaacgaggagattgt
gtgatccggcctagctctaggggtactgatcacttggctgtcacatggaaggtggacacg
ggtatttaccaacacatcgacgtattggagcttgacaaacccaacgagttctcacttggg
aggattttgaagattggaggtcgatactcgtattcagatcttgacgagctgattgtctct
catgttagggcgatggcacggaaggtagaagaaatgatccaacacgaaaaatacaaagga
agctccgatgatatgtccaattttttgaaaacttacctgatggccaatcccgatcggtcc
acctatgcattttgtattgataaggaggtggctggtaatttcttgattggattcaaagcc
aacaagaattcgccaatgcagacatggaacgtaaaggtatcacctggggcgtatgaactt
catggcactcaagctggtgacatgctatctctgtgtaatgcatttaagacccaatatacg
gcgcgagcagcagcagctacggcagctgggcatggaggcaggtctgaaatctatggtcgc
caaacaccgtcacttgctcccaacggacgcaccccaatccacggtggtcgcaccccaatg
ctcaccaaccgcacacccctggttggtagtcggactccactcgtcacgcctcggtaccca
ggctctacacctcaatatccacctctacctgctgctggacaaagctatcaacaacccgca
cccccgggttattctgccccgcctccacagccacctgctcaggattgggcaccgcctcgt
caaggatatgtgtaa
DBGET
integrated database retrieval system
