Puccinia triticina (wheat leaf rust): PtA15_10A353
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Entry
PtA15_10A353 CDS
T09180
Name
(RefSeq) uncharacterized protein
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
ptrc
Puccinia triticina (wheat leaf rust)
Pathway
ptrc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ptrc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PtA15_10A353
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ptrc03041
]
PtA15_10A353
03009 Ribosome biogenesis [BR:
ptrc03009
]
PtA15_10A353
Enzymes [BR:
ptrc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
PtA15_10A353
Spliceosome [BR:
ptrc03041
]
Complex A
U2 snRNP components
U2 related factors
PtA15_10A353
Complex B
PtA15_10A353
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
PtA15_10A353
Ribosome biogenesis [BR:
ptrc03009
]
Eukaryotic type
90S particles
Helicases
PtA15_10A353
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
SRP54
Flavi_DEAD
nSTAND3
T2SSE
Motif
Other DBs
NCBI-GeneID:
77801414
NCBI-ProteinID:
XP_053024485
LinkDB
All DBs
Position
10A:complement(join(3816877..3817072,3817188..3817243,3817332..3817636,3817720..3817842,3817923..3819014,3819096..3819289,3819395..3819474,3819709..3819909))
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AA seq
748 aa
AA seq
DB search
MVAGADNPYLAHLPESGALDGFIPRKVSGKQVLEAMDHSTNPFTGKQYSKQYKTILEHRK
ALPVFKQMADFYKMYNKSQFVVMEGETGSGKTTQIPQYAVYGDLPHMKDRQIACTQPRRV
AAMSVAKRVADEMDVKLGEEVGYSIRFEDCTSSKTILKYMTDGMLLREALHDNLLSRYST
LILDEAHERTLATDILMGLLKDIAKRRPDLKIIVMSATLDAAKFQSYFNSAPLLKVPGRT
FPVETFYTPEPEPDYLEAAIRTVLMIHRDEEPGDVLVFLTGEEEIEDACRKISIEADQLL
QTSSHVGPLKCVPLYSSLPPQQQQRIFDPPPPPLTPNGPPGRKVVISTNIAETSLTIDGI
VYVIDPGFSKQKIYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTESSFVKE
LEDQTYPEILRSNLASVVLELKKLGVDDLVHFDYMDPPAPETVIRALELLNYLAAFDDEG
NLTPLGEIMADFPLDPQLSKMLISSPEFKCSNEILSIAAMLSVPNPFLRPHNQRKEADDA
RAQFTHPEGDHLTLLNLFHAYKASSDPNSWCWQNYVANRAMLQADNVRNQLKRTMERFDL
DLVSIDHKHKDYFKNIRMAVTTGYFMQVAHKEREKGVYTTRDGQIVGLHPSCGLDSNPEW
VLYNEFVLTTRNFIRICTEVKPEWLLDFAPLYYDVNTMPDGEAKRALQKIAIRKSNSATS
KRIENDQDPESKARKRQRKLDKKLKAAK
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atggtcgctggcgcggacaacccctacttggcccatctgcccgagtcgggcgcactcgat
ggctttatccccagaaaggtttcaggtaaacaagtcttggaggccatggatcattcgaca
aacccgttcactgggaaacaatactcgaaacagtacaagaccatcctcgaacatcgcaag
gctttacccgtcttcaaacagatggcagatttttacaagatgtataacaagagccaattt
gtggtgatggaaggtgaaacaggatcaggaaaaacaactcaaattccgcagtatgcggtt
tatggcgatcttcctcacatgaaagatcgacagattgcttgcacccaaccaagacgagtg
gcagccatgagtgttgcaaagcgtgtggctgatgagatggatgtcaagcttggtgaagaa
gtcggctacagcatccgatttgaagattgcaccagctcaaagacgattctgaagtatatg
accgatggtatgctgctccgagaggctctgcatgacaaccttctttcgcgttattcaact
ctgatccttgacgaggctcacgaacgtacccttgcaaccgatatcttgatgggcttgttg
aaagacattgcaaagcgtcgccctgacttgaagatcatcgtcatgtctgccacactcgac
gcggccaagttccagagctatttcaactcggcaccactgctcaaggtgcctggtcggaca
ttcccggtcgaaacgttttacacacccgagcctgaacccgattatctcgaagctgcgatt
cgtacagtcttgatgatccacagagatgaagagcccggcgatgtgctggtctttcttact
ggtgaagaagaaatcgaagacgcgtgtagaaagatcagcatcgaagccgatcagcttctc
cagacttcctcccatgttggcccattgaaatgcgttcccctttactcctctctcccccct
caacaacaacaacgcatctttgatccgccgccgcccccgctcacccccaatggacccccc
ggccgaaaagttgtcatctcaacaaacatcgccgaaacctcattgacgatcgatgggatt
gtatatgtgatcgaccccggattttcgaaacaaaagatctacaatccacgtatccgagtt
gaatccttgttggtctcacccatctccaaagcttctgcccaacaacgagccggtcgagcc
ggtcgtacacggcccggaaagtgtttcaggttatacaccgaaagcagttttgtgaaggaa
ttggaggaccaaacctacccggagattctgcggtcgaacctggccagtgtggtgctagaa
ttgaagaaattaggggtcgatgatttggttcacttcgactacatggaccccccagcccct
gaaaccgtcatccgagcgttggaactgctcaactacttggctgcgtttgatgatgaaggc
aacctgactccgcttggagagatcatggccgactttccgttggatcctcaattatcaaag
atgttgatttctagccctgagttcaaatgtagtaacgaaatattaagtatcgctgctatg
ttgtctgtgcccaacccatttcttcgaccccacaatcagcgcaaggaagctgatgatgcc
cgggcgcaattcacccatcccgaaggagatcatttgacgcttttgaacttatttcatgca
tacaaagccagttctgatccgaacagctggtgttggcaaaactacgtcgccaacagagcg
atgttgcaagccgacaacgtgcgcaaccagttgaagaggacgatggaacggttcgacctc
gatctcgtgtcaatcgaccacaaacataaggactatttcaaaaatatccggatggctgtc
accaccggttacttcatgcaagtggcccacaaagaacgcgagaaaggcgtctacactact
agggatggtcagatcgtcggcttgcatcctagctgcggtctcgatagcaatcccgaatgg
gtcctctacaatgagttcgtcttgaccactcgaaactttatcaggatttgcacggaagtg
aaaccggaatggttacttgatttcgcaccgttatactacgatgtaaacacgatgccggat
ggcgaagccaaacgagccctccaaaaaattgccataaggaaatcaaactcggcgacttct
aaacggatcgaaaacgaccaggatcctgagtctaaggcccgcaaacgtcaacgaaaattg
gataaaaaattgaaggctgccaagtaa
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