Puccinia triticina (wheat leaf rust): PtA15_10A363
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Entry
PtA15_10A363 CDS
T09180
Name
(RefSeq) uncharacterized protein
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
ptrc
Puccinia triticina (wheat leaf rust)
Pathway
ptrc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ptrc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PtA15_10A363
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptrc03400
]
PtA15_10A363
DNA repair and recombination proteins [BR:
ptrc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
PtA15_10A363
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Rad54_N
Helicase_C
ResIII
HDA2-3
VirE3
Motif
Other DBs
NCBI-GeneID:
77801425
NCBI-ProteinID:
XP_053024495
LinkDB
All DBs
Position
10A:join(3872266..3872372,3872454..3872700,3872803..3873317,3873408..3873781,3873861..3874157,3874227..3874515,3874597..3874957,3875082..3875251,3875338..3875406,3875501..3875609)
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AA seq
845 aa
AA seq
DB search
MNPGTPTQKTAVSSTSEARTPASVISGKSQVDPTEILSRKFTPVRPAASLQNKSSRSRKS
VNYTEDGQAPDTDTKKKKQKKNGDDDEFEEDENGKMVKKVKRDRFGRPIKEMVVTPVRKF
GKVAVTPLNDSPKTFSLPTMRDLKTGTILEVRLSGMPLGARPQPIFAPRPLHDPLADTAI
VLWDPTVDDRPAPKPVSQGDPERTPAEIEAEQARLKLEIERQKGPHKSLPDLLGIKKAGD
PKDIKKVPVVIDPRLAKTLRPHQVEGVKFLYRCATGMVEQGAKGCIMADEMGLGKTLQCI
SLLWTLLKQSPIAGKPSIEKAIVACPSSLVKNWANEFDKWLGPGAINPLAVDGKQTKANL
LTSVRQWVSATGRRVPQPVMIVSYETLRGSLVEELGRTPVGLLLCDEGHRLKNADNQTYA
ALNGINCERRVILTGTPIQNDLSEYFALLNFANPNYLGDRAQFRKTYELPILRGRDSDSS
EAEVALAEAKLKELTTKVQKFIIRRTNDLLSKYLPVKYEHVVFCAPSSFQLDLYRHFIES
PDLQKLLKGVGCQPLKMLGILRKLCNHPDLLDLQTDIPGSEKCFPEGYRSKDPRAPARPE
LSGKMTVLERFLHKIKTETTDKIVLISNFTQTLDVMEKMCRERRWGSLRLDGTMQITKRQ
KLVDRFNDPEGKEFIFLLSSKAGGCGINLIGANRLILFDPDWNPASDQQALARVWRDGQK
KTCFVYRFILTGSVEEKVFQRQSQKMKLSASVVDEQEDEARMFSRESLKELFRLNENTKS
DTHDVYKCKRCRDGKQVVKAPAMLYGDQSTWNHYTNAHMVDLHDDLLRSEVGLNEVTACF
QYIST
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atgaacccaggaactcccacacagaagacggcagtatcatcaacatcggaagctaggacc
ccagcatccgtgatcagtggtaagagtcaagtagaccctaccgaaatactttctcgaaaa
ttcaccccagtccgcccggccgcctcgctgcagaataaatcatccaggtcgcggaaatcg
gtcaattatacggaggatggccaagccccggatactgacacaaagaaaaagaagcagaag
aaaaacggtgatgatgatgaattcgaggaagacgagaacggaaagatggtcaagaaggtc
aaacgcgatcgatttggaagacctatcaaagaaatggtcgtcactccagttaggaaattt
ggaaaggttgctgttactccactaaacgactcgccgaaaacgtttagtttaccaacaatg
agagatctcaagacagggacgatactcgaggtgagactatcaggaatgccgctgggcgct
cgaccgcagccgatctttgcgccgcggccactgcacgatcctttagcggacactgcgatc
gtcttgtgggacccgacggtggatgaccgaccggccccgaagccggtgagccagggagac
ccagaacgaacaccggccgagattgaggccgaacaggctcggctaaagctcgaaatcgaa
cgccagaagggtccccataagagcttgcccgacctgctcggaatcaaaaaggccggcgac
ccaaaggatatcaagaaagttcccgttgttatcgaccctcgtttggcaaaaaccctcaga
cctcatcaagttgagggcgtcaagttcctctaccgctgtgctactggcatggtcgaacag
ggcgcaaagggctgcattatggccgacgaaatgggcttaggtaaaactttacaatgtata
agtcttttgtggacgctattaaaacaatcaccaattgcgggcaagccatcgatagagaaa
gcaattgttgcatgtccatcctcgctggtgaagaactgggcaaacgagtttgacaagtgg
ctaggaccgggggcgatcaacccgcttgcggtcgatggaaaacagacaaaagcgaatctc
ttgaccagtgttcgtcagtgggtctcagctacggggcgccgagtccctcagccggtaatg
attgtctcttatgaaaccttgaggggcagtctcgtcgaggagttgggtcgcacgcccgtc
ggcctattactttgcgacgaaggacatcgactcaaaaatgctgacaaccaaacctatgcc
gcactaaacggcattaactgtgaacgacgggtcatcttaacgggcaccccgatccagaac
gacttatctgaatattttgccctgttgaatttcgccaatccgaattacttgggcgaccga
gcccagttccggaagacgtacgaattgccaatccttaggggacgagattcggattcaagc
gaagctgaagtggccttagccgaagctaaactcaaggagctcaccaccaaggtccaaaaa
ttcattatcagaaggactaatgatttgctatccaaatatttaccggtcaagtatgagcat
gttgtgttttgtgctccatcatcattccaactcgatctttaccgtcactttatcgaatcg
cccgatctacaaaagctcttaaagggagtgggctgccagcccttgaagatgttgggcatc
cttcgcaaattatgtaaccaccctgatttgctcgacttgcagacagatattccgggctcc
gagaagtgttttccggagggctatcggtccaaggatccccgagcgcccgctcgacctgag
ttgtctggtaaaatgaccgtgctcgaacggtttttgcacaagatcaagactgaaacgacg
gacaagatagtgttgattagtaactttacccaaaccttagatgtgatggaaaagatgtgt
agagagaggagatgggggagcctaaggctagacgggacgatgcagatcaccaagcgacag
aagctggtagatcgtttcaacgaccccgaagggaaggaattcatcttcctattaagtagc
aaggccggcgggtgtgggatcaacctgatcggcgccaatcggctcatcttgttcgatccc
gattggaaccccgcctccgatcaacaagcactcgcgcgtgtttggagagacggacaaaag
aaaacctgtttcgtgtatcgcttcatcttgacgggaagtgttgaggagaaagtctttcaa
agacagtctcaaaagatgaaactctcggcgtcagtggtcgatgaacaagaagatgaagcc
cggatgttctcacgcgaatcattgaaagaactgttcaggctcaatgagaacaccaaatcc
gatacgcatgatgtctacaaatgtaaacgctgtcgagacgggaaacaggtcgtcaaagct
ccggcgatgttatacggagaccaatcaacatggaatcattacacgaatgcacatatggtc
gacttgcatgacgatctcttacgctccgaagtcgggttgaacgaagtgaccgcttgtttc
caatatatatcaacctaa
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