Puccinia triticina (wheat leaf rust): PtA15_11A100
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Entry
PtA15_11A100 CDS
T09180
Name
(RefSeq) uncharacterized protein
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
ptrc
Puccinia triticina (wheat leaf rust)
Pathway
ptrc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ptrc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PtA15_11A100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptrc03400
]
PtA15_11A100
Enzymes [BR:
ptrc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
PtA15_11A100
DNA repair and recombination proteins [BR:
ptrc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PtA15_11A100
Prokaryotic type
PtA15_11A100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-GeneID:
77801870
NCBI-ProteinID:
XP_053024967
LinkDB
All DBs
Position
11A:join(991038..991790,991865..992170,992255..992443)
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AA seq
415 aa
AA seq
DB search
MHIKKLSHSPPETKVSIKRRMSDPDPPCKDDEPKFLGTSTRGRNQLSLTDAWGLTRSDDI
GPENSFKRARIAKNPKKEAKPAKGSSTRAAQPIKIPTLSSSIGSPTPSHSSLFSVESSWD
NSELSDMFNDLDFGFDPSLFPLEVSPVHGLHPSWLEPLKTVLILPQIISLHQQLGPNYLG
YDYKRGEKPLQCQAEISPPPQDLYNWSRLTPLDRVKVVILGSAPHFQPAQAHGLAFSQPT
TCARISGTIRNIHRELAYEYPDKFVRPHHGSLVSWAQAGVLLLNIVQTTQRDDQKAHDKL
GWQEFTAKILEIVSRDGGSSYTNSNQRGTSKGIVFIGWGEEATQLINSVGVLSSNRHHQI
LTSPGGPTPLLSSNRGFFKSNHFQMANQFLSATYGPKHTIDWWDLQPLDPYSVSL
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgcatatcaaaaaactgtcgcactcgccccctgaaactaaagtttcgatcaagcgacgg
atgagtgatccggatccaccttgtaaggatgatgaaccgaagtttctcggtacgagcacc
aggggcaggaatcagctgtccttgaccgacgcgtggggcttgactcgctcggacgacatc
ggccccgagaacagtttcaagcgggcacgaatcgctaagaatcccaagaaagaagccaag
ccggcgaagggctcctcgacacgggcggcccaaccgatcaaaatcccgactctttccagc
tcgatcggctcgcccacgccgagccacagctcgctgttttcggtcgagagttcgtgggac
aactcggagctcagcgacatgttcaacgacctcgacttcggcttcgacccctccctgttc
ccgctcgaagtcagcccggtccacggcctccatccctcctggctcgagcccctcaagacc
gtcctcatcctaccccagatcatcagcctccaccaacaactcggcccgaattatctcggc
tacgactataagcgcggcgagaagcccctccagtgtcaggctgaaatctcacccccgccc
caagatctctacaactggagtcggctcacccccctcgatcgcgtcaaagttgtcatcctc
ggctctgcgccccattttcagcccgctcaagcccatggcctggcattctcccagcccacg
acttgtgcacgcatttcaggcacaatcagaaatatacaccgagaattggcgtatgaatat
ccggacaagtttgtccgtccacaccacggctcgcttgtttcgtgggcccaggccggcgtt
ctgttgctcaatattgtccagaccacgcagcgggatgatcagaaggcgcacgataagctt
ggctggcaagagttcactgccaagatcttggagattgtcagtcgtgacggcggctcgtcc
tacaccaactccaatcaaagaggtacctcaaaaggcattgtgtttattggctggggtgag
gaggccactcaactaatcaactctgtgggggttctttcctcaaataggcaccatcaaatc
ttgacgagtccaggaggccctacccctttgttgtccagcaatcgtggattctttaagtcg
aatcatttccaaatggcaaatcagttcctgagtgccacttatggccctaagcatacaatc
gattggtgggatctgcaaccgctagatccctattcagtctctctttga
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