Puccinia triticina (wheat leaf rust): PtA15_11A26
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Entry
PtA15_11A26 CDS
T09180
Name
(RefSeq) uncharacterized protein
KO
K12859
U5 snRNP protein, DIM1 family
Organism
ptrc
Puccinia triticina (wheat leaf rust)
Pathway
ptrc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ptrc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PtA15_11A26
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ptrc03041
]
PtA15_11A26
Spliceosome [BR:
ptrc03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
PtA15_11A26
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DIM1
Thioredoxin
Thioredoxin_7
DUF5845
Thioredoxin_8
Motif
Other DBs
NCBI-GeneID:
77802044
NCBI-ProteinID:
XP_053024894
LinkDB
All DBs
Position
11A:complement(join(323182..323271,323373..323429,323530..323559,323666..323722,323813..323845,323957..324067,324202..324303))
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AA seq
159 aa
AA seq
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MSYFLPHLPSGWHVDQAILAEENRVVIIRFGHDWDSECMRMDETLYGISEKVKNFAVIYL
VDITKVPDFTKMYELYDPCTVMFFYRNKHIMIDLGTGNNNKINWAMDDKQELIDIVETIY
RGASKGRGLVITQLGTSIVSYVSLAPSLFRRKSLDDSVL
NT seq
480 nt
NT seq
+upstream
nt +downstream
nt
atgtcttactttctcccacatttgccttccggatggcacgtcgaccaagctatcctggcc
gaagaaaatcgggttgtcattatcaggttcggtcatgattgggattcagagtgcatgagg
atggatgaaactctctacggaatctcagaaaaagtgaagaatttcgcggtgatctatctg
gtcgacatcactaaagttccagatttcacgaagatgtatgaattatacgatccttgtaca
gttatgtttttttacagaaataagcacatcatgattgatttgggaacagggaacaacaac
aagatcaattgggcgatggatgacaaacaagaattgattgacatcgtggagacgatttat
cgaggggcgagtaaaggccgaggtttggtaattactcaactcggtacaagtattgtcagt
tatgtttctcttgccccttcactattccgccgcaaatcgcttgatgattctgtattgtaa
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