KEGG   Puccinia triticina (wheat leaf rust): PtA15_12A411
Entry
PtA15_12A411      CDS       T09180                                 
Name
(RefSeq) uncharacterized protein
  KO
K10739  replication factor A2
Organism
ptrc  Puccinia triticina (wheat leaf rust)
Pathway
ptrc03030  DNA replication
ptrc03420  Nucleotide excision repair
ptrc03430  Mismatch repair
ptrc03440  Homologous recombination
ptrc03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:ptrc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PtA15_12A411
   03420 Nucleotide excision repair
    PtA15_12A411
   03430 Mismatch repair
    PtA15_12A411
   03440 Homologous recombination
    PtA15_12A411
   03460 Fanconi anemia pathway
    PtA15_12A411
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ptrc03032]
    PtA15_12A411
   03400 DNA repair and recombination proteins [BR:ptrc03400]
    PtA15_12A411
DNA replication proteins [BR:ptrc03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RPA (replication protein A)
    PtA15_12A411
DNA repair and recombination proteins [BR:ptrc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    RPA (replication factor A)
     PtA15_12A411
   MMR (mismatch excision repair)
     PtA15_12A411
  DSBR (double strand breaks repair)
   HR (homologous recombination)
     PtA15_12A411
SSDB
Motif
Pfam: RPA_C tRNA_anti-codon RMI2 PCI
Other DBs
NCBI-GeneID: 77802913
NCBI-ProteinID: XP_053025977
LinkDB
Position
12A:join(4271568..4271634,4271710..4271852,4271954..4272105,4272211..4272370,4272468..4272664,4272749..4272808,4272921..4272942)
AA seq 266 aa
MTSYASRFADGEEYGGGGGFMQGSQNNNNTPGGTRRVEQALRPVTIKQVLDAEASNTDSS
ISIQDIDVTNVSFCGVVRDIVRHATNVVLQVEDGTGGIEVRKWIDSSDGESEGFEAETGI
QIRDWVRVIGSAKLFNNKKSIAGLRLEKITDFNEINYRLLDAVRVTLAYERGSTGAGDKM
NIDQSTNHVSHGKIVQPKNPNRTAKQNKIMEFFARTQPPDEGINIHEIARECHLDVKDVI
DETAQLIHEGELFTTVDDEHLMTTTS
NT seq 801 nt   +upstreamnt  +downstreamnt
atgacaagttacgcctcacgcttcgcagatggcgaagagtatggcggtggaggcgggttc
atgcaaggctcccaaaataataacaacacgccgggtggcacgcgacgagtcgaacaagct
ttgcggccagttacgatcaaacaagtgctggatgctgaagcatcaaacaccgactcgtca
atttcgatccaagatatcgatgtgaccaatgtttcgttttgtggggtggttcgtgacatt
gttagacacgcaaccaatgtcgtcttgcaggtggaagatggaactggtgggatcgaggtc
cgaaagtggatcgattccagtgatggagagagcgaggggttcgaggctgagacgggcatt
caaattcgtgattgggtacgagtcatcggatcagcaaagctcttcaataataaaaagagc
atcgccggacttcgcctagagaaaatcaccgacttcaacgaaatcaactatcgtcttctg
gatgcagtccgagtcacgctggcttacgagcgtggatcgacaggcgctggcgataaaatg
aacatcgaccaatcaactaaccacgtcagccatgggaagattgtccagcctaaaaacccc
aacaggactgccaaacagaacaagatcatggagttcttcgcacgcactcaacctccggat
gagggcatcaacatccatgagattgctagggagtgccatcttgacgtgaaagatgtgatt
gacgaaacggcccagctgatccatgaaggcgagttatttacgacagtggacgatgagcat
ctcatgactacaacctcgtaa

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