Puccinia triticina (wheat leaf rust): PtA15_12A576
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Entry
PtA15_12A576 CDS
T09180
Name
(RefSeq) uncharacterized protein
KO
K10839
UV excision repair protein RAD23
Organism
ptrc
Puccinia triticina (wheat leaf rust)
Pathway
ptrc03420
Nucleotide excision repair
ptrc04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ptrc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
PtA15_12A576
09124 Replication and repair
03420 Nucleotide excision repair
PtA15_12A576
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
ptrc03051
]
PtA15_12A576
03400 DNA repair and recombination proteins [BR:
ptrc03400
]
PtA15_12A576
Proteasome [BR:
ptrc03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
PtA15_12A576
DNA repair and recombination proteins [BR:
ptrc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
PtA15_12A576
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GFIT
Motif
Pfam:
UBA
ubiquitin
XPC-binding
UBA_7
Rad60-SLD
Ubiquitin_5
UBA_9
UBA_3
Dsc3_N
OTU1_UBXL
Rad60-SLD_2
Motif
Other DBs
NCBI-GeneID:
77803094
NCBI-ProteinID:
XP_053026141
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All DBs
Position
12A:join(5884564..5884579,5884727..5884929,5885010..5885327,5885407..5886025,5886138..5886187)
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AA seq
401 aa
AA seq
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MKLTFKTLQKQQFVLDVEPSTTVEKLKILIKESQGFEPEQQKLIFSGKVLADDKTIEQIG
VKEKDFFVVMLIKPKTAPTVPAPATAAASTSATTPTPAAAQPATAAPPSTTAPASIDADS
SSAAPPATETQDSGILVGSNLQKTIDEIVNGMGFPRDQVTKAMRAAFNNPDRAVEYLMNG
IPAGLDALAPPATLPTNAPSTLNPSATIPSAAAPPAAGSRNLFEAAAEHVAQLRQPGEAA
LPTPAPAQAGAQSASTTRALEALRNNPQMIQLRQLVQQNPALLQPFLQQLGQSNPNLLAQ
LTSNPTLLMSFLAEGAEGLDDDPSLPPGMLGAAGEPEDQTQYVQVSQEERDAIERLVGLG
FDRQLVVQAYFACDKNEEMAANYLLEHGFDDFEDAATGGNA
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcacattcaaaacccttcagaagcaacagtttgtcttggatgtcgaaccttcg
acaacggttgagaaactcaagattctcatcaaagaatctcaaggtttcgaacctgaacaa
caaaagctgatcttcagtggtaaggtcttggcagatgacaaaacaatcgagcaaatcggt
gtcaaggagaaggacttctttgtggtcatgctgatcaaacccaagactgctccaaccgtc
ccagcccctgctactgctgctgcttcaaccagcgccaccacacctacaccggccgccgct
caacccgctacggcggcccctccgtcaactactgcccccgcctcgattgatgctgatagt
tccagcgcggctcccccggctactgaaacccaagattcaggaattttggtcggttccaac
ctacaaaagacgatcgacgaaatcgttaacgggatgggattcccgagagatcaagtgacg
aaggcgatgcgtgctgcattcaacaatccagatcgggcagttgaatatttgatgaatggt
attccggcaggcttagatgcccttgcacctccagctactctgccaaccaacgcgccatca
acgttgaatccatccgctacgattccatccgctgctgctccccccgcagcgggctcgcgc
aatctatttgaagctgccgcagagcatgtggctcaactaagacagccaggcgaagccgcc
cttccgactccggcgcctgctcaagctggggctcaatcggcatctacaactcgtgcgctc
gaagcactacggaacaaccctcagatgatccaacttcgacagctggtccaacagaatccc
gctctcttacagccgttcttacagcaactcggacagagcaatcccaacctactcgcccaa
ctgacctccaacccaaccctgttgatgtctttcttggccgagggggctgaggggctggat
gacgatccgtcattaccgcctgggatgttaggtgcagccggagagccggaggaccaaacc
caatacgtccaagtcagccaagaagaacgggatgcgatcgaacgattggtcggtctaggc
ttcgaccgacaattggtcgtccaggcttattttgcgtgtgataagaacgaagagatggcc
gcaaattacttgctcgaacacgggtttgatgattttgaagacgcggctactggtggtaat
gcttaa
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