Puccinia triticina (wheat leaf rust): PtA15_13A94
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Entry
PtA15_13A94 CDS
T09180
Name
(RefSeq) uncharacterized protein
KO
K02326
DNA polymerase epsilon subunit 3 [EC:
2.7.7.7
]
Organism
ptrc
Puccinia triticina (wheat leaf rust)
Pathway
ptrc03030
DNA replication
ptrc03082
ATP-dependent chromatin remodeling
ptrc03410
Base excision repair
ptrc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ptrc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PtA15_13A94
03410 Base excision repair
PtA15_13A94
03420 Nucleotide excision repair
PtA15_13A94
09126 Chromosome
03082 ATP-dependent chromatin remodeling
PtA15_13A94
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ptrc03032
]
PtA15_13A94
03036 Chromosome and associated proteins [BR:
ptrc03036
]
PtA15_13A94
03400 DNA repair and recombination proteins [BR:
ptrc03400
]
PtA15_13A94
Enzymes [BR:
ptrc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PtA15_13A94
DNA replication proteins [BR:
ptrc03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
PtA15_13A94
Chromosome and associated proteins [BR:
ptrc03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
PtA15_13A94
DNA repair and recombination proteins [BR:
ptrc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
PtA15_13A94
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CBFD_NFYB_HMF
TAFII28
EFM1_middle
Motif
Other DBs
NCBI-GeneID:
77803669
NCBI-ProteinID:
XP_053026250
UniProt:
A0ABY7D3W9
LinkDB
All DBs
Position
13A:complement(join(977862..977929,978020..978147,978215..978323,978431..978539,978648..978653))
Genome browser
AA seq
139 aa
AA seq
DB search
MPKVKKIVQPPDVQQSVGGHQQAGSFVGIEAVELPRAVVMKLAKSTGPGNMKLAKEVPVA
LTKASTVFISYLVAIAHDIAAARSEKSLNARHVLEACKELQWADSDELQKTLKVELEAFR
KLNAAKKAQKTSKPEGEAA
NT seq
420 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaagtgaagaaaatcgtacagccacctgatgtccaacaatcggtgggtggacat
caacaagccggttcgttcgtcgggatcgaagccgttgaattaccgagggctgttgtgatg
aagcttgcaaaatcgaccgggcctgggaacatgaagttggctaaagaagtcccggtggcg
cttacgaaagccagcacagttttcattagctatctagtcgcgattgcacatgacattgcg
gcagcacgctccgagaagtctctcaacgctcgacacgttctcgaggcttgtaaggagctt
cagtgggccgacagcgacgagcttcaaaagactctcaaggtcgaactcgaagctttccga
aaactgaatgcggcaaagaaagcgcagaagaccagtaaaccggagggcgaggccgcgtag
DBGET
integrated database retrieval system