Puccinia triticina (wheat leaf rust): PtA15_14A194
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Entry
PtA15_14A194 CDS
T09180
Name
(RefSeq) uncharacterized protein
KO
K12587
exosome complex component MTR3
Organism
ptrc
Puccinia triticina (wheat leaf rust)
Pathway
ptrc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ptrc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PtA15_14A194
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptrc03019
]
PtA15_14A194
Messenger RNA biogenesis [BR:
ptrc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
PtA15_14A194
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
Motif
Other DBs
NCBI-GeneID:
77803780
NCBI-ProteinID:
XP_053026867
UniProt:
A0ABY7D3R1
LinkDB
All DBs
Position
14A:join(2139255..2139462,2139620..2139698,2139834..2140410)
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AA seq
287 aa
AA seq
DB search
MSSTLFGHLQGAASQAGNSNSNPTIDRRRFVGPETSTPFPDFPVVTTTTGSATNADRADG
RTHKDSRPIGIKVGLISQANGSCYIESGKSKVICAVYGPKPRSSLSNSASLSPLVISMRF
APFCMAGARMIPTALGGVETTVSQLTQQALMPALLPMSDSSLVEIHITVLEWDGPLSPGP
CVLASSIALASAGIPTLGLVIPTTLALSKDVYLDPTATEAEAASAIFDLASIPAMGTVTH
VGFRSTTDWKSAPIEADIFDRCLDLCKSNAEIIHGLASAALKDHLAT
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagcacactcttcggacacctccagggtgcagccagccaggctggaaacagcaac
agcaatcctaccatcgaccgcagaagattcgttggccctgaaacttccacccctttcccc
gatttcccagttgtaacaacaacgaccggctcggcaacaaacgccgatcgagctgatggc
cgcacccacaaagatagtcgcccgataggcattaaagttggtctgatttctcaagcgaat
gggagctgttacatcgaatctggaaaatcgaaagtgatttgtgcagtgtatggcccgaag
cctcgatcatccttgtcgaactctgcatcactgtcgcctcttgtgatcagtatgagattc
gcgcctttttgtatggccggcgctcgaatgatacccactgctttggggggtgtcgaaacc
acggtatctcagttgacccagcaagcattgatgcctgctctgctgccgatgagcgactcg
tccctcgtcgagattcacatcaccgtacttgaatgggacggcccactgagtcctggtcca
tgtgtcttggcttctagcatcgctctcgcttcagccgggatcccgaccctcggcctggtg
atccctaccacgctcgccctctccaaagatgtctatctggatcccaccgcaaccgaagcc
gaggccgcgtcagcgatcttcgacctcgcctcgatccccgcgatgggcacagtcacccat
gtcggtttccggtcgactactgattggaaatccgcacccatcgaagccgatatctttgat
cgttgtctcgacctgtgtaaatccaatgctgaaatcattcatggtcttgcctctgcggct
ctcaaagatcatctcgctacttga
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