Puccinia triticina (wheat leaf rust): PtA15_14A68
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Entry
PtA15_14A68 CDS
T09180
Name
(RefSeq) uncharacterized protein
KO
K12597
protein AIR1/2
Organism
ptrc
Puccinia triticina (wheat leaf rust)
Pathway
ptrc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ptrc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PtA15_14A68
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptrc03019
]
PtA15_14A68
03016 Transfer RNA biogenesis [BR:
ptrc03016
]
PtA15_14A68
Messenger RNA biogenesis [BR:
ptrc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
PtA15_14A68
Transfer RNA biogenesis [BR:
ptrc03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
PtA15_14A68
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCHC
AIR2-like_ZnK4
zf-CCHC_2
eIF3g
Motif
Other DBs
NCBI-GeneID:
77804132
NCBI-ProteinID:
XP_053026742
LinkDB
All DBs
Position
14A:join(1065227..1065370,1065449..1065544,1065613..1065681,1065739..1065813,1065887..1066309)
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AA seq
268 aa
AA seq
DB search
MEPTTAPEVPSETDHIPTTKRYWKESNGLLCSICLEPDHQARNCSHQLCLTCGAIDEHIT
RQCPVSLVCHSCGSRGHLARHCPSSRTSGAHCARCDSTIHLTLNCPSIWRAYEEETNDKP
QRIMRACYYCGNTGDHFGDECPFRRPSLHTEPSAFSDRSVSKRDSRHPQLYGSGRDSSPR
RKDYDRQHDVGRQDSYRPHDPPPSRKKPIRPGRRDRAANARAIEVEDDDDWFSKRQRKKI
PPKPGPSPKPSGSKPNRIGGSYKGGYIK
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atggaacccacgacggcacccgaggtcccaagtgaaacggaccacattccaacgacaaag
cggtattggaaagaatcaaatggactcctctgctcgatttgccttgaaccggatcatcaa
gctcgaaattgcagccaccaactgtgtctaacttgcggtgccattgatgagcacataact
cggcaatgtccggttagtctggtgtgccatagctgtggtagtcgaggtcatctggcacgg
cattgtccatcttctaggacatccggagctcactgtgcacgttgtgactcgaccattcat
ctcaccctcaattgtccttccatatggcgggcctatgaagaagaaaccaacgacaaaccc
cagcgaattatgcgagcctgttactactgtggcaacaccggcgaccactttggagacgaa
tgtccctttcgaagaccctctcttcacacagagccctccgcgttttcagatcgctcagtt
tctaaacgagattcacggcatccccaactgtatgggtctggaagggactccagcccgcgc
cggaaagactatgatcggcagcacgacgtaggaaggcaggatagctacaggccacacgat
cccccaccaagtcggaaaaagcccattcgaccaggtcgcagggacagggctgccaacgcg
cgagccatagaggtcgaagacgacgacgattggttttcgaaaagacaacggaaaaagatt
cctccaaagcccggaccttctcctaaaccgagtggatcgaaaccaaacaggattggtgga
tcctacaagggaggttacatcaaatga
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