| Entry |
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| Name |
(RefSeq) uncharacterized protein
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| KO |
| K12882 | nuclear cap-binding protein subunit 1 |
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| Organism |
ptrc Puccinia triticina (wheat leaf rust)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:ptrc00001]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PtA15_15A289
09122 Translation
03013 Nucleocytoplasmic transport
PtA15_15A289
03015 mRNA surveillance pathway
PtA15_15A289
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:ptrc03019]
PtA15_15A289
03041 Spliceosome [BR:ptrc03041]
PtA15_15A289
Messenger RNA biogenesis [BR:ptrc03019]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
PtA15_15A289
Spliceosome [BR:ptrc03041]
Common components
Common spliceosomal components
Cap binding complex
PtA15_15A289
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
15A:complement(join(2975300..2975512,2975594..2975970,2976052..2976428,2976511..2976727,2976832..2977013,2977084..2977352,2977442..2977690,2977803..2978114,2978202..2978706,2978812..2979109,2979210..2979285))
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| AA seq |
1024 aa
MNNGQSEERTSQHREENVTPHKRPRDSDSNADYSSPRYQQSRRYNDRNPRDSQRRRTGGY
NASPNQRSISVAQQITDNFLKAIWSFGDSERFDFRQEIPELVKRIESHHAQLQLTDDILK
AFRIAAAELPHKLPHLALLISFLSVPPPTNETSINKDPPLPSIGVQIIRDLARAFQLHID
NRRWRSTRLYLHLFGHLHALSRPLVSSQSLLALLRAIFSATTDELTCTGARADECLRIVC
EGLLRSNLLKSEDAEIKKEVNELVESIRVHMVVNRRLDRSLFNEPDCLSQYIDPIEELVA
ALEGGPSVDILPVLDEAFGPLLEQRITASGVESAYPTPFDLPIVLLPPDVEEPGLETHPP
APKPENLGNDPGPIPLDSKDRTNYLGVKLFLKLFSDSTVPNRATANGVVLRTLVNDVIDI
FEVNRKECAKILLELPRWVGRGTFKTKGTAPKPKTDEAGNRIEESATESSEWILEHLLLE
SIVTSVFAIPTPPIRPVVYYHSLIVELCRLSPSTVAPALGKSVRRLYGGLGEVGADAVTV
RLEPEGIRRFAEWFGVHLSNFGFLWAWKDWSDVSDLPVPHPKRVFVSRVIELEIRLSYYD
RIKETVPSVFLDVELMPSDAPGPVFEYEDPAHRDHLAALDVVQLLKHKEPVSRLLDYLTK
MQERLAAEGIEESVQDVTREVAIQALLNVGSRSFSHFLNILERYLELLRNLTNSASARAS
LLQTVSKFWRKNGQFELIVIDKLLEYRVIDPIDSLRHSFETYKTSQWGELQFWDGMKMTI
EKVTRRVKASRTKLAKLKKDEEDQRDRQRAAGGEILEAGNGAANMGDINMKDGIDGEEGK
KDEERTEEVKGETIQLKEELETMRRGEIATAERELEANLTEQVIVLAEAIGRFSSARSEA
EERLKNEQDSQPADEVVEPSNCDQKDQVRKVSAKDVAFWKAWWLRGWCREFYRLFGPEIS
TQFDQVMDRLDHQKQPVGENGHAADQAGNEVDPQTNGLLSVDEKIKEELKLTKDWVETVG
LQSM |
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| NT seq |
3075 nt +upstreamnt +downstreamnt
atgaacaacggccaatctgaagagagaacttcccagcatcgagaagagaacgtcaccccg
cacaagcggcctagagattcagattcgaatgcagattattcgtcgcccagatatcagcag
agccgacgatacaatgatcgaaacccaagagacagtcaacgccggcgcacgggtggttat
aatgcctctccaaaccagcgctccatctcggtagcccagcagatcaccgataacttcttg
aaggccatatggagcttcggtgactctgaacgcttcgattttcgacaagaaatccctgaa
ctcgtcaagagaatcgagtctcatcacgcccaacttcagctgacagatgacatcctcaaa
gctttccgcatcgcggctgctgagttaccacacaagttaccccacttggcactgctgatc
tcttttctctcggtgcctccaccaaccaatgagacgtccataaataaagacccccctctg
ccctcgataggcgttcaaatcatacgggatctggcccgtgccttccaattgcacattgat
aatcgtcggtggcgatcgaccagattatatcttcacctgtttggccatttgcacgcgctc
tcccgaccattggtctcctctcagtctcttctcgccctccttcgtgctatttttagcgca
acgacagacgaattgacttgtacgggtgcccgcgcagacgagtgtttgagaatcgtttgc
gaagggctgttgcgtagtaatctgttgaaaagtgaggatgctgagattaagaaggaagtc
aacgagctcgtcgaatcgattcgagtccatatggtcgtcaaccgtcgtctcgatcgctcg
ctgttcaatgaacccgattgcctttctcaatacattgatcccatcgaagaacttgttgct
gcgcttgagggtggacctagtgttgacatcctaccagttcttgacgaggcctttggccca
ctactcgaacaacgtatcaccgcatctggcgtcgaatcggcatatccaacacctttcgat
ttgccgatcgtactcttaccgcccgacgtcgaagagcctggcctagaaacccatccaccg
gctcccaaacctgagaatctcggtaatgatcccggcccgatacccttggactccaaggat
cgcacaaattatcttggtgtcaaattatttttaaagcttttttctgacagtacggtaccg
aatcgagcaacagccaacggagtggtactacgcaccttggtgaacgatgtgattgatatc
ttcgaagttaatcgcaaagaatgtgccaagattctactcgaactaccgcgttgggtcggt
aggggtactttcaaaacgaagggtacagcccctaagcccaaaactgacgaagcgggaaac
agaattgaagaatcggcaacggaatcatccgaatggatacttgagcatcttctccttgag
tcaatcgtcacatcagtatttgctatacccactccgccaatccgacccgtagtttactat
cacagtctgatagtcgaattatgtcgactttcgccctcgactgttgcccccgctctcggg
aaatctgttaggaggctttatggtggattgggagaagttggggctgatgctgtcacggtt
agattggaacctgaggggattagacgctttgccgagtggttcggagttcatctttcgaat
ttcggatttttatgggcttggaaggattggtcggacgtatcagacctgccagtgcctcat
cccaagcgggtattcgtctctcgagtgatcgaactggagattcgcttgagttactacgac
cggatcaaggaaacagtccccagtgtatttttagacgtcgagcttatgccatcagatgca
cctggccccgtttttgaatacgaagatcctgcccaccgagaccatcttgctgcgctggat
gttgtccagctcttgaagcataaagaacctgtgtctcgactgctggactacctcactaaa
atgcaagaacgattggcagccgaaggcattgaggaatccgttcaagacgttactcgagag
gtggctatccaggcactattgaacgtcggatcccgatcgttttcgcactttttgaacatt
ctagaaaggtatctggagctcctacgaaacctgacaaattccgcctccgcgcgagcttca
ttgctccagactgtgtcgaaattctggagaaagaatggccaatttgaactgatagtgatt
gacaagctactagaataccgagtgattgatccgatcgatagtctccgacatagtttcgaa
acttataagacttcacaatggggtgaattgcaattttgggatggaatgaaaatgacgatc
gaaaaagtgactaggagggtgaaagctagtcgtactaaattagccaagttaaagaaggat
gaggaggatcaacgtgatcgccaacgtgctgctggtggtgaaatcttggaagctggaaat
ggcgctgccaatatgggcgatatcaacatgaaagatgggatcgatggagaggaggggaag
aaagatgaggaacggacggaggaagtcaaaggggaaacgatacagctgaaagaagaattg
gagaccatgagacgaggtgaaatagccacggctgaaagggaattggaagccaatttaact
gagcaagtcatagtcttagctgaggcgattggccgattctcgagcgctcgttcggaggca
gaagagagacttaaaaatgaacaggacagtcaacccgctgatgaggtagtagaaccgtca
aactgcgaccaaaaggatcaagttcgcaaggtttctgcgaaggatgtcgcattttggaaa
gcctggtggctcagaggttggtgtagagaattctacagattgtttggaccggaaatttcc
acacaatttgatcaagtcatggaccgattggatcatcaaaagcaaccagttggtgaaaac
ggacatgccgcagaccaagccggaaacgaagttgatccacaaactaatggattgttgagc
gttgacgagaagatcaaggaggaacttaagttaactaaggattgggtcgaaaccgttggc
ttacaatccatgtaa |
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