Puccinia triticina (wheat leaf rust): PtA15_16A123
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Entry
PtA15_16A123 CDS
T09180
Name
(RefSeq) uncharacterized protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
ptrc
Puccinia triticina (wheat leaf rust)
Pathway
ptrc03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ptrc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
PtA15_16A123
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ptrc03000
]
PtA15_16A123
03021 Transcription machinery [BR:
ptrc03021
]
PtA15_16A123
Transcription factors [BR:
ptrc03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
PtA15_16A123
Transcription machinery [BR:
ptrc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
PtA15_16A123
RNA polymerase III system
TFIIIB
PtA15_16A123
RNA polymerase I system
SL1/TIF-1B
PtA15_16A123
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
DUF4295
Motif
Other DBs
NCBI-GeneID:
77804677
NCBI-ProteinID:
XP_053027772
LinkDB
All DBs
Position
16A:join(1065889..1066079,1066202..1066289,1066359..1066631,1066700..1066789,1066868..1066936)
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AA seq
236 aa
AA seq
DB search
MAQSTFVLPGPPASASLHHNAGSISPDQQTLSHPVAQEASQTSHHPDDPKGIITNVQGIV
PTLQNIVATVNLECRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVVT
GAKSEDDSRLAARKYARIVQKLGFEAKFTEFKIQNIVGSCDVRFPIRLEGLAYNHGHFSS
YEPELFPGLIYRMVKPKVVLLIFVSGKIVLTGAKVREEIYQAFNNIYPVLSEFRKP
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atggcccagtctacctttgtcctgcctggcccacccgcttctgcctcccttcatcataac
gctggctctatctcccccgaccagcaaaccttatctcaccccgttgcacaggaagcctct
cagacctctcatcaccccgatgatcctaagggtatcatcaccaatgtccaagggattgta
cctacccttcaaaacattgttgccacggtcaatctcgaatgtcggcttgatctcaaaact
attgctcttcatgctcgaaatgcggaatataatccaaagcgttttgctgccgtcatcatg
cggatccgagagcccaaaacaacggcattgatctttgcttcaggaaagatggtggtcacc
ggtgcaaagtctgaagacgactcaaggctagcagctcggaagtatgcccgcattgtccag
aagcttggcttcgaggctaagttcaccgaattcaagattcaaaacattgttggaagttgc
gacgttcgctttccaatccggttggagggtcttgcctacaaccacgggcacttctcatcg
tatgagcccgagctctttcctgggcttatctatcgcatggtcaagccaaaggtggttctg
ctgatattcgtctcgggaaaaattgtcctgaccggtgccaaggtgcgcgaggaaatctac
caagcctttaacaacatctatcccgtcttgtccgagttccggaaaccttag
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integrated database retrieval system
