KEGG   Puccinia triticina (wheat leaf rust): PtA15_16A373
Entry
PtA15_16A373      CDS       T09180                                 
Name
(RefSeq) uncharacterized protein
  KO
K12830  splicing factor 3B subunit 3
Organism
ptrc  Puccinia triticina (wheat leaf rust)
Pathway
ptrc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ptrc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    PtA15_16A373
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ptrc03021]
    PtA15_16A373
   03041 Spliceosome [BR:ptrc03041]
    PtA15_16A373
   03036 Chromosome and associated proteins [BR:ptrc03036]
    PtA15_16A373
Transcription machinery [BR:ptrc03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    SAGA/TFTC/STAGA complex
     PtA15_16A373
Spliceosome [BR:ptrc03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    PtA15_16A373
 Complex B
    PtA15_16A373
 Complex C
   U2 SnRNP specific factors
    PtA15_16A373
Chromosome and associated proteins [BR:ptrc03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    STAGA complex
     PtA15_16A373
    TFTC complex
     PtA15_16A373
SSDB
Motif
Pfam: Beta-prop_RSE1_1st Beta-prop_RSE1_2nd CPSF_A Beta-prop_LRRK2
Other DBs
NCBI-GeneID: 77804951
NCBI-ProteinID: XP_053028020
LinkDB
Position
16A:complement(join(3990938..3991090,3991155..3991215,3991277..3991502,3991581..3991663,3991729..3992033,3992099..3992317,3992378..3992485,3992548..3992716,3992778..3992990,3993052..3994050,3994118..3994296,3994360..3994650,3994745..3994885,3995008..3995430))
AA seq 1189 aa
MHLYNLTLLPPAAITAAAVGCFAGTRQQDICVCRAGTTLELLRPDPATGRLTSLATEHAF
ASIRALAPFRLTGAAKDLLILGSDSGRIVVLEFDPATNTFIKLHQETFGKSGARRVVPGQ
FLATDPKGRAVMVAAVEKSKLAHKSNAIIHHIVGVDVGFENPLFAALEVDYGEADQDPTG
EAFNAAEKMLTYYELDLGLNHVVRKWSEPTEPRANMLLQVPGGQSPSQPDKFDGPSGVIV
CCEDMLIYKHPNVPEHRVPIPKRNSALADPAQGLLIVAAVMHKMRGAFFFLIQSEQGDLF
KVTIDHEDEQVQALKIKYFDTVPVASSLTILKSGFLFVAAETGNHALYQFEKLGDDDQEP
EFSSASYPDNGASGVLPGAFFKPRPLENLVLSDELESLAPITGARTLGTSETAQLVTCSG
SGARSSVRVLRQGLEVAEIVSSALPGPPTNVWTTRVSEQDAHDRYIVLGFLNATLVLAIG
ETIVEVADSGLLTHAPTIAIQQLDGTGLLQIHPAGIRHILADGQVTEWKTPPGRTIVAAT
SNRRQVVVGLSGGELIYFELDLEGQLNEYQEMKQMGAAVTSLSLAEVPRGRQRTPFLAVG
LDNATVQIISLDPSSVLETISLQALTAVPSSICIAELRDSSIDKNNDTLFVNIGLSNGVL
LRTVLDSVNGQLTDTRTRFLGSRPVKLLRVKVDGKTSVIGLSSRTWLNYTFQNLLHFDPL
LYDSLDNVHSFSAELCPEGLIGIVGSSLRIFTIPKLGVKVKQDPLPLAYTPRRMLIDPRT
NHVITVESEHRTMAPGVQADRLALHKAQGLDTDTLDPVAFGLPRAEAGQWASCIRISDPV
EKTTLARIDLADNEAATALAIVAFAFAAHVPPDEPLLVVGSAKDAFVQPRTCKAGFLRVY
RFVDGGKGLELLHKTETDEIPSALLGFQGRLAAGIGKALRLFDLGKKKLLRKAEAAGFPT
AIVLLAAQGARILVGDAQHSVAYAVYKPVENRLVVFADDVVPRWTTCATMVDYDTVAGGD
RFGNLWVSRIPKTVSDEVDEDPTGATIMHEKGALMGAPHKLNTLVHFHLNDIPTAILKTS
LVPGGRDVLVYTGLQGTVGALVPLAAREDVDFFQTLEMHMRAERPSLAGRDHLAYRGYYF
PVKNCVDGDLCEAFALLPSHKQLQVAAELDRSVSDVLKKIEAVRVASAF
NT seq 3570 nt   +upstreamnt  +downstreamnt
atgcacctctacaacctcaccctgctcccgcccgcggccatcaccgccgccgccgtcggc
tgcttcgccggcacccgccagcaggacatctgcgtctgccgcgccggcaccaccctcgag
ctgctccgcccagaccccgccaccggcagactcacctccctcgccaccgaacacgccttc
gcctccatccgcgcactcgcccccttcagactcaccggcgccgccaaggacctgctcatc
ctcggctcagactccggccggatcgtcgtcctcgagttcgaccctgccacgaacaccttc
atcaagctccaccaggagaccttcggcaagtccggcgcacgcagggtcgtccccggccag
ttcctcgccaccgaccccaagggccgcgccgtcatggtcgcagcagtcgagaagagcaag
ctggcccacaagtccaacgccatcatccaccacatcgtcggcgtcgacgtcggcttcgaa
aaccccctcttcgccgcactcgaggtcgactacggcgaggctgaccaggacccgacggga
gaggcattcaatgcagccgagaagatgctcacctactacgaactcgacctcggcctcaac
cacgtcgtccgcaagtggtccgagcccaccgagccccgcgccaacatgctcctccaggtg
cccggcggccagagccccagccagccagacaagttcgacgggccctcgggcgtgatcgtg
tgctgcgaggacatgctcatctacaagcaccccaacgtccccgagcaccgcgtccccatc
cccaagcgcaactccgccctcgccgaccccgcacagggcctcctcatcgtcgccgccgtc
atgcacaagatgcgcggcgcgttcttcttcctcatccagtccgagcagggcgacctgttc
aaggtcaccatcgaccacgaagacgagcaggtccaggcactcaagatcaagtacttcgac
accgtgcccgtcgcctccagtctgaccatcctcaagtccggcttcctcttcgtggccgcc
gagaccgggaaccatgcgttgtaccagttcgagaagctcggcgacgacgaccaggagccc
gagttctcctcggccagctacccggacaacggcgcatcgggcgtgctgccgggcgccttc
ttcaagccgcgcccgctcgagaacctggtgctgtcggacgagctcgagtcgctggcgccg
atcacgggcgcgcggacgctggggacgagcgagacggcccagctggtgacgtgcagcggg
agtggggcgcggagcagcgtgcgcgtgctgcggcaggggctcgaggtggcggagatcgtg
agctcggcgctgccgggcccgccgacgaacgtgtggacgacccgggtctccgagcaggac
gcacacgaccgctacatcgtccttggcttcctcaacgccaccctcgtcctggccatcggc
gagacgatcgtcgaggtcgccgactccggcctgctcacccatgcccccaccatcgccatc
cagcagctcgacggcaccgggctgctccagatccaccccgccggcatccgccacatcctc
gccgacggccaggtcaccgagtggaagacgccccccggccggaccatcgtcgccgccacc
tccaaccgtcgccaggtcgtcgtcggcctctccgggggggagctgatctacttcgagctc
gacctcgagggccagctgaacgagtaccaggagatgaagcagatgggcgccgccgtcacc
agtctctcgctcgccgaggtgcccaggggccgccaacgcacgcccttcctcgccgtcggc
ctcgacaacgccaccgtccagatcatctccctcgaccccagctccgtcctcgagaccatc
tccctccaggccctcaccgccgtgccctcctccatctgcatcgccgagctccgcgactcg
tccatcgacaaaaataacgacaccctcttcgtcaacatcggcctctctaacggcgtcctc
ctccgcaccgtcctcgactccgtcaacggccagctcaccgacacccgcacccggttcctc
ggctcccggcccgtcaagctcctgcgcgtcaaagtcgacggaaagaccagcgtcattggg
ctctcctcgcgcacctggctcaactacaccttccagaacctgctccacttcgacccgctg
ctctacgacagtctggacaacgtgcacagcttcagtgccgagctgtgtcccgagggcctc
atcggcatcgtcggctcctcgctccggatattcacgatccccaagctcggcgtcaaggtc
aaacaggaccccttgcccctcgcttacaccccccgcagaatgctaatcgacccgcgcacc
aatcacgtcatcaccgtcgagtccgagcaccgcaccatggcgcccggcgtccaggccgac
cggctcgccctccacaaggcgcaagggctcgacacggacacgctggacccggtcgcgttc
ggcctgccccgggcggaggcggggcaatgggcgtcgtgcatccggatcagcgacccggtc
gagaaaacgacgctggcgcggatcgacctggccgacaacgaggcagcgacggcgctcgcg
atcgtcgccttcgccttcgccgcccacgtgccccccgacgagcccctgctggtcgtcggc
tccgcgaaggacgccttcgtccagccccggacatgcaaggcggggttcctgcgggtgtat
cggttcgtggacgggggcaagggcctggagctgctgcacaagacggagacggacgagatc
ccgagcgcgttgctcggcttccagggccggctggccgccgggatcggcaaggccctgcgg
ctcttcgacctgggcaagaagaagctgctgcgcaaggccgaggccgccggcttccccacc
gccatcgtcctcctcgccgcccagggcgcacggatcctcgtcggcgacgcccagcactcc
gtcgcctacgccgtctacaagcccgtcgagaaccggctcgtcgtcttcgctgacgacgtc
gtgccccgctggacgacctgtgcgacgatggtcgactacgacaccgtggccggcggcgac
cggttcggcaacctctgggtgtcgcggatcccgaagacggtctcggacgaagtcgacgag
gaccccacgggcgcgacgatcatgcacgagaaaggcgcgctcatgggcgccccccacaag
ctcaacaccctcgtccacttccacctcaacgacatccccaccgccatcctcaaaacttcc
ctcgtccccggcggccgcgacgtgctcgtctacaccgggctccagggcaccgtcggcgcc
ctcgtcccgctcgccgccagggaagacgtcgacttcttccagaccctcgagatgcacatg
cgcgccgaacggccgagcttggccggccgcgaccacctcgcctaccgcggctactacttc
cccgtcaagaactgcgtcgacggcgacctctgcgaggccttcgccctcctccccagccac
aagcagctccaggtcgccgccgagctcgaccgcagcgtctcggacgtgctcaagaagatc
gaggccgtccgggtcgctagcgccttctga

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