Puccinia triticina (wheat leaf rust): PtA15_17A286
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Entry
PtA15_17A286 CDS
T09180
Name
(RefSeq) uncharacterized protein
KO
K11756
chromatin structure-remodeling complex subunit RSC1/2
Organism
ptrc
Puccinia triticina (wheat leaf rust)
Brite
KEGG Orthology (KO) [BR:
ptrc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptrc03021
]
PtA15_17A286
03036 Chromosome and associated proteins [BR:
ptrc03036
]
PtA15_17A286
Transcription machinery [BR:
ptrc03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
RSC complex
PtA15_17A286
Chromosome and associated proteins [BR:
ptrc03036
]
Eukaryotic type
Chromatin remodeling factors
RSC complex
PtA15_17A286
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAH
Bromodomain
DUF7877
Motif
Other DBs
NCBI-GeneID:
77805281
NCBI-ProteinID:
XP_053028359
LinkDB
All DBs
Position
17A:complement(join(3211631..3212343,3212422..3212465,3212545..3213539,3213631..3213684,3213765..3213842,3213941..3213994,3214096..3214170,3214258..3214362,3214443..3214508))
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AA seq
727 aa
AA seq
DB search
MLSSIEKEACVKLVESCFSFHNRNGRLISTPFEELPHKAHTVYYEKVSQPKSFRSVLNQL
NQDHYDNLKDIYTDLKQVFSNMSYIVPKSGRDWQDAIRMDQYVDEAWEQKAVEKLLPSLE
VLFPDSSHPRLEPTNRRSNANEVSDSQPTSKSSIKPISTASAPLKRSRSQSIASSASADT
ARTPIASSHVSTTATRNQNKRSRKSLPTPVNNTPDDDSPITAKDRVPDSESGWMRDGNST
NLNSQALATFIITRLKNERLPADSFSSHSVPHQGALSDTTIAQDSPALELDVIEAQLQKN
QYTSMEAFDRDLHQAFVDAERAYLKTPERLAGLYVLKRLYQELTQGDGTQTLRDSIPVGT
AKKLASVTMGPGNRLHLPRNDEPVKLKAKDKVLLEGIHHKGDYIRIGDWVHIFNPDDPSR
PIIGQIFNTYRRVDTGRRTVNVCWYYRPEETVHYISRTFLANEVFKTGNFIDHAVEDILG
RCLVLFYTKYVRGRPSAPLWTPEMPTYICEHRYKDDQYSFKKIKNWDSCVPSNIRNEGTE
ENFQSYPTIQQVATLVRLPSPFLSAPSDRSKGSGEPIIATPQEVTKELPKDQTKCHDLNL
SLLQIEKILGRLPTNPPRRPHGVEPGEDSAQSTRSPSILTKPLSLPHFQPSSSSVTPSIS
TAVSPNLSFPAPTGKSFDLTSLELCHLVGHSKSGPLKRPPCLLDLVAGQDCFEKLPEKLF
GEEPLSV
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgctcagttcgattgagaaggaggcttgtgtcaaactcgtcgagagctgctttagcttt
cacaacagaaacggaagattgattagtactcccttcgaggaattaccccacaaagcgcac
accgtctattacgaaaaagttagccagcccaagagctttaggtctgtcctgaatcaattg
aatcaagatcattatgataatctcaaagatatatacactgacctcaagcaggtgttttcc
aacatgtcttacatcgtccctaaatccggccgcgattggcaagatgctatacgaatggat
caatatgttgatgaggcctgggaacagaaagcagtggaaaaacttctcccctctctcgag
gttttattccctgactcatcgcacccacgattagagcctaccaaccgcaggtccaatgcg
aatgaggtctcggactcccagcccacaagtaaatcatcaatcaagccaatttcaaccgct
tcggctcctctcaagcgaagccggtcacagtcaatcgcttcctctgcctcagctgacaca
gcgcggacaccaattgcgagctcacatgtttcaactacagccacaagaaatcaaaataaa
cgtagcagaaaaagcttacccactcctgtcaacaacacgcctgatgatgacagtccaatc
accgccaaagatcgtgtcccggattcggagtctggatggatgagagatggcaactcgaca
aacctgaactcacaagcccttgcgacttttatcatcactcgactcaaaaacgagcgcctt
ccagccgatagtttctcgtcacattctgtaccccatcaaggtgctttatccgatacgact
attgcccaagactcacctgcactcgagttggatgtgattgaagcccagctgcagaaaaac
cagtatacgtcgatggaagccttcgaccgagatcttcatcaagcttttgtcgatgccgag
agagcttatctcaagactcctgagcgcctggctggtttgtatgtcttgaaacgtctctac
caagagttgactcaaggagatggcacgcagactctcagagactcgatccccgttggaact
gcgaaaaagctagcaagcgtgaccatgggcccgggtaaccgactgcacttacctcgcaac
gacgaaccagtaaaactgaaagctaaggacaaagtcttactcgaagggattcatcacaag
ggggattatataaggattggcgattgggttcatatcttcaaccctgacgacccttcacgg
ccgatcattggtcaaatctttaatacttaccgacgcgtcgataccggtcgccggacggta
aatgtttgttggtattacaggcccgaggagactgtccactacatctcgcgaactttcctc
gcaaatgaggtcttcaagactgggaacttcatcgatcatgcggtggaggatatcttggga
aggtgcctggtgctgttttacacaaaatacgtgcgaggtcgaccatccgcccccctttgg
acacccgagatgccgacttacatttgtgagcatagatacaaggatgatcaatacagtttc
aagaagatcaaaaattgggattcctgtgtgccatcgaacatccgaaacgagggcaccgaa
gaaaacttccaatcgtaccctaccatccagcaagttgcgacactagtaaggttaccatcg
ccctttctgagtgctccaagtgatcgatcgaagggaagtggggaaccgatcatcgccacc
cctcaagaggttacaaaagaactacccaaagaccaaacgaaatgtcacgatttgaatctg
tcgctcttgcagatcgagaagatattaggtcgcttgccgaccaatcctcctcgtcgacca
catggggttgagcctggcgaagacagtgcccaatctacccgctcccctagcatcctaacc
aaacctctcagtcttccccatttccaaccatcctcgtcttcggtcaccccttccatttca
acggctgtttcgcccaacctctcatttcctgctccgacaggcaagtccttcgacttgacc
tcccttgaattatgccacttggttggccattctaagagcggcccactcaagcgcccccct
tgcctgttggatctcgtcgccggtcaagattgttttgaaaaactcccagagaaattgttt
ggtgaggaacccttgtccgtttaa
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