Entry |
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Name |
(RefSeq) uncharacterized protein
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KO |
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Organism |
ptrc Puccinia triticina (wheat leaf rust)
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:ptrc00001]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PtA15_17A297
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:ptrc03041]
PtA15_17A297
Enzymes [BR:ptrc01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PtA15_17A297
Spliceosome [BR:ptrc03041]
Complex A
U2 snRNP components
U2 related factors
PtA15_17A297
Complex B
PtA15_17A297
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
17A:join(3281768..3282019,3282136..3283409,3283501..3283728,3283826..3284102,3284316..3284516,3284630..3285275,3285360..3285747,3285848..3286052,3286135..3286213,3286307..3286392,3286538..3286660)
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AA seq |
1252 aa
MNLLGITKTARSALATITMVQSLLYLTGIETGILIEGVTVGTDQLVQIATHTKSKKETVI
EKEIARRIATAIVLIVDDMKIVVIPRREQNQQPSASLDRPSSPKLSDIPSTSIEIPSRLP
PPTATLAAQDGSEQALSTSQHAPTTSSSDNQSQKDLDSSAPGSAVAKARAIAEAREGRLP
GETLEQQKLRMKRERLEQWKAKKALEENSSSNSTPLAPLITKSDPIQSVQVANKSKNKLD
SSGSIAPKGLPKKPLAADEATAAALAAAAISARLGTAPPPTLAPTKLMKNAPPIGIKGLP
TKPTFNVFPDPTSNNSKLSSALGIEDDSGKTKIQKLKFEAINADDDLLKLVEAEEDSDEE
DLVDGGHAGYNKRKIIDGVEEETGVTGAGPDEVDEEQSESGSKIRLSQAVEKTTKKRFEA
VSNVETSVQPAQAMDIDQEEIDPLDAYMSGVTDEVTKVNDRDQKKMNQLAAGAKKVLEED
DDHNDEEDQAGGSEDEIDKTNLRPEDIMALVAKKLKKKDLAPVDHQKISYETFRKAFYHP
PAEVEEMSDEQAENIRIAMDGIKIRGQDCPKPVMKWSWFGLHAACLEVVKNLGYQSPTPI
QGQAVPAIMSGRDVIGVAKTGSGKTLAFLLPMFRHIKDQRPLDALEGPIAMIMTPTRELA
TQIYKEGRPFLKSLGLRAACAYGGSPLKDNIADMKRGAEVIVCTPGRMIELLTTNSGRVI
NMRRVTYLVLDEADRMFDMGFEPQVMKIVNQIRPDRQTVLFSATFPKQMEALARKILRRP
LEITVGGRSVVAAEIEQIVEVRQESTKFNRLLEILGRSYNEDSESRSLVFVDRQESADNL
FRDLLKKGYPCLSLHGGKEQVDRDQVIADFKSGVTPIVIATSVAARGLDVKQLKLVINYD
APNHMEDYVHRAGRTGRAGNKGTCITFIAPDQERYAVDLLRALVTSGAKYPEELKTMSDS
FLEKIKSGKAQASGSGFGGKGLDRLEKDRDAKSRAERSAYGEPGGEEASKEEIGTGVAGA
AASGTTASAIPTVEIPEINVEVKRGPAPDSNRRSQPAAKPTPPAPVDVAATPALTAALKA
AQAAAQAKGLDASGIARAQNVVADLNAKLRSMIAAKNAQAQAGNHESANNLNNNNNRSKD
PDATDFHAIVPINDYPQKARWKVTNKETMVQLVDSTGASVTNKGVFYEKGKEPGPDEPPK
LHLLVESNEEWRVQRAITEIKHILIEATTQALEAESRNPGHHQAVGRYNVLG |
NT seq |
3759 nt +upstreamnt +downstreamnt
atgaatctcctcggcatcaccaagacagcaaggtccgctctagcgactatcacaatggtt
caaagtcttctctatctcaccgggatcgagaccgggatcttgatcgaaggcgtgaccgtc
gggaccgatcagctagtccagatcgctacacacacaaagtcaaagaaagagaccgtgata
gagaaagagatcgcgagaaggatagcaaccgctatcgtactgatcgtcgacgacatgaag
atcgtggttatccctcgccgcgagcaaaatcagcagccctcagcatcactcgaccgccct
tcttcacctaagctctcagatatcccctccactagcatcgaaatcccatccaggcttcct
ccgcctacagctacattagctgcccaagacggatccgagcaggctctgtccaccagccag
catgctcctaccacaagtagttcagataaccagagccagaaagacctcgattcttcggct
cccggctccgcagttgccaaggctcgagcgattgctgaggctcgtgaaggtcgtcttcca
ggtgagacgctagaacaacaaaaactccgtatgaagcgtgaacgtctcgaacagtggaag
gccaaaaaggctctcgaggagaactctagttctaattccactcctcttgcacccctcatt
accaaatctgatccaatccagagtgtccaagttgccaacaaatctaagaataagttggac
tcatcgggctcaattgctccgaagggtctaccgaagaagccacttgctgcagacgaagct
acagctgctgctctcgccgctgctgcaatctccgctcgtttaggaactgcccctccgccc
accctggcccccaccaagctcatgaaaaacgcacctccgattgggatcaaaggtttgccc
accaagccaacgttcaatgtgtttccagaccccacttcgaataactcgaaactcagctct
gctttgggtattgaggatgacagcggtaaaacgaagattcagaaattaaaattcgaagct
atcaatgctgatgatgatcttttgaagctggtggaggccgaggaagacagcgacgaggaa
gatctagtagatggtggccatgctggatataataaacggaagattattgacggagtagaa
gaagaaaccggagtaaccggtgccggtcctgatgaagtagacgaagagcagagtgaaagt
ggatcaaagattcgactgtcacaagctgtagagaaaacgaccaaaaaacgatttgaggcg
gtttcgaatgtggagacgtccgtacagcctgctcaagctatggatatcgatcaggaagaa
atcgatcctttggatgcttatatgtctggagttaccgatgaagtgaccaaagtcaatgat
cgggatcaaaaaaagatgaatcaattggcggctggagctaaaaaggttctagaagaggac
gatgatcacaacgatgaagaagatcaggcaggtggcagtgaagacgagatcgacaagact
aatttgcgacccgaagacatcatggcacttgtcgccaagaaattgaagaagaaagatttg
gctccagtggatcatcaaaagattagctacgagacattcaggaaagcattttatcaccca
ccagcagaggtagaagaaatgtcagacgaacaggccgaaaacattcgtattgcaatggat
ggcatcaaaattcgcggccaagactgtcccaaacccgtgatgaaatggagttggttcgga
ttacatgctgcatgcctagaagtcgtcaaaaatcttggttaccaatcgccgactccgatt
caaggacaagctgtacctgcgatcatgtcaggtcgtgacgtgattggggtagccaagaca
ggatctggaaagaccttggcattcctattacctatgtttcgacatattaaagatcaaaga
cctctcgatgcgctcgaaggacccatagcgatgatcatgacgcctacgagagaattagcc
actcagatctacaaagaagggaggccttttctcaagtctctgggcttaagggccgcgtgt
gcttacggtggatcgcccctgaaagataacattgccgacatgaagcggggggcagaagtg
attgtctgtactccgggaaggatgatcgaacttctgactactaattctggtcgagtgatc
aatatgcgtcgagttacttaccttgtcttggatgaagctgatcgaatgtttgacatggga
tttgaaccacaggtaatgaaaatagtcaatcaaattcgacccgatcgccaaactgtgctc
ttctcagccaccttccccaagcaaatggaagccttggctcggaagattctccggagacca
ttagaaattaccgtcggtggtcgatcagtagtcgccgcagaaatcgaacagatagttgaa
gtccgacaagaatccaccaagtttaaccgattactcgaaattttaggcagatcatacaat
gaggattccgaatcacgttcactagtattcgtcgatcgacaagaatcagccgataattta
ttccgggatcttctcaagaagggatatccctgtttgtccttacatgggggcaaagaacaa
gttgatcgagaccaggtcattgcggatttcaaatcaggagtgactccaatcgtgattgca
acgtctgttgctgctagaggcttagatgtgaaacaactcaagttggtaattaattacgac
gctcccaaccacatggaagattatgtccaccgtgccggtcgtacaggcagagcaggcaat
aaaggtacttgtatcacctttatcgcccctgaccaagagagatatgctgttgatttacta
agggcgctggtcactagtggtgccaaatatcccgaagaacttaagacaatgtcggattcg
tttttggagaagattaaatcagggaaagctcaagcctcggggtctgggtttggtggtaaa
ggtctagacagactagagaaagaccgagacgccaagtcacgtgccgaaagatcggcctat
ggtgagcctggaggagaagaggcgagcaaagaagaaattggaactggagtggctggtgcc
gcggctagtggtactacggcaagtgccattccgacggttgaaatcccagaaatcaatgtg
gaagtcaagagaggacctgcgcctgattcaaacagacgttcacaacctgctgccaagcca
actccgccagcaccggtagatgtagcagcaactcctgctcttactgctgcactcaaagca
gctcaagcagcagcccaggcgaaaggtctggatgcaagcggaatcgccagagcccaaaac
gtggttgctgacttgaacgccaaattgcgatcaatgattgctgctaagaacgctcaagcc
caagccggaaaccatgaatcagccaacaacctcaacaacaataacaatcggtctaaggat
cctgatgcgaccgatttccatgctatcgtccccatcaacgattatcctcaaaaagcgaga
tggaaagtcacgaacaaagagactatggttcaactggttgatagtactggagcttcggtc
accaacaaaggtgtattttatgagaaaggcaaagaacctggtccggatgagccaccgaaa
ttacatctattggtcgagtctaatgaagagtggagagttcaacgagctatcaccgaaatc
aagcatattttgatcgaagccactacgcaagcattagaagctgaatcgcgaaaccctgga
caccatcaagctgttggtagatataacgtgttgggctaa |