Puccinia triticina (wheat leaf rust): PtA15_17A355
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Entry
PtA15_17A355 CDS
T09180
Name
(RefSeq) uncharacterized protein
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
ptrc
Puccinia triticina (wheat leaf rust)
Pathway
ptrc03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ptrc00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
PtA15_17A355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptrc03021
]
PtA15_17A355
03036 Chromosome and associated proteins [BR:
ptrc03036
]
PtA15_17A355
Transcription machinery [BR:
ptrc03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
PtA15_17A355
Chromosome and associated proteins [BR:
ptrc03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
PtA15_17A355
PBAF complex
PtA15_17A355
GBAF(ncBAF) complex
PtA15_17A355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
ZZ
Myb_DNA-bind_6
Myb_DNA-binding_2
Zn_ribbon_2
DUF4428
Vesi_VP2
Motif
Other DBs
NCBI-GeneID:
77805358
NCBI-ProteinID:
XP_053028428
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All DBs
Position
17A:join(3770501..3771217,3771334..3772725)
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AA seq
702 aa
AA seq
DB search
MSDLPPDLPAHQQLQPISYDPSGTETRKRASVEPADPSSSNSNPVIDGPEKRQRLDENRR
DSLPTGMAIDQLPPSAHQRPLANSDRSPQADPIVSNDAIQPQSSQQPPGTDQDQSSASKD
QSGKSAPPFDQRKRQEEQAKQYLLAQTQAIIIPSYAAWFDLTKIHPLEKKSLPEFFNGRN
RSKVPSIYKDYRDFIVNSYRLNPSEYLTVTACRRNLAGDVCAIMRVHAFLEQWGIINYQV
DLDTRPAPVGPPFTGHFRVLLDTPRGFMPLHSGTVSRKTPASLSAPAAPSVPAPPSAPGS
AAPSQQQGAPLNIDLRKDIYANTSESGPQVIRCDVCGTDCSKVSYHHTRLRNYDICPNCY
QEGRFGSQMNSAEFIKLDRPIGMPVDSKWTDQELLLLLEGLEMHSDDWEKIAQHVGGTKT
KEECILQFLRMPIEDEFLRGSNAELNTSSILGLGKIPLSGAENPVLSVLSFLVGLVEPEL
VAEMAGKSVDKIKQDLRSQVLAIQEDSARKSSESQKMAGEETGVGSDLRMDVGETKANPI
EESTHQNQSMEIDEASPAEQAPKRTAVDIAAAAIASASAKALVLGSEDEVELGKLMETVT
EQTIKKLELKLKQFERLESAVEVERRNLEQWRQNLSIERQAVVKEIAEFKKMKAGAENNL
EAALDQRNGLMGLPIQAVPVPPNETNGELGFGEPGQGTLNMR
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacctgcctcccgatctgcccgcccaccaacagctccagccgatcagctacgac
ccatctggcacggaaacccgcaaacgggcatcagtcgagcctgccgacccctcttcatca
aactcaaacccagtcatcgacggcccagagaagaggcagaggctggatgagaaccgaaga
gattcactgccgacgggcatggccatcgatcaactcccgccatcagctcaccagagacct
ctcgcgaactctgatcggtcgcctcaagcggatcccatcgtctccaatgacgcgatccaa
ccccagtcctcacaacaaccccctggcaccgatcaagatcagtcctcagccagcaaggac
cagtccggaaagagcgcgccccccttcgatcaacgaaaacgacaggaggaacaggccaag
cagtatctgctcgcccaaacccaggccatcatcatcccttcctatgcggcctggttcgat
ctcaccaagattcaccccctggagaagaagtctttgccggaatttttcaatggacgaaac
cgctccaaggtgccctcgatctacaaggactatcgcgactttatcgtcaacagctatcgt
ctcaacccttccgaatacttgacggtgaccgcctgcaggcgaaacctagctggtgatgtg
tgcgcgatcatgagagtgcatgccttcttggaacagtgggggatcattaactatcaggtt
gacctggatacccgtccggctccagtcggcccaccctttactggtcatttccgtgtcctt
cttgacactcccagggggttcatgccgctccactcaggcaccgtttcgcgtaaaacacct
gcctccctctcagctcctgccgctccctccgtcccggccccgccttcagctccgggctct
gctgctccttcgcaacagcaaggcgcgcctctcaacatcgatttacgtaaggacatctac
gcaaacacctcagaatccgggccacaggtgattcgatgtgatgtttgtgggacggactgt
agtaaggtttcttatcaccatacccggctcaggaactacgatatctgtccaaactgctac
caggaaggacgctttggcagtcagatgaactcggcagaattcatcaaacttgaccgtcca
atcggcatgccagttgactcgaaatggaccgatcaagagctcctcctcctcctcgaagga
ctcgagatgcattctgatgactgggagaaaatcgcacaacatgtgggtggaacgaagacg
aaggaagaatgtatcctccaattcttacggatgccgatcgaggatgaatttttacgaggc
tcgaacgccgagctcaatacgagctcgattcttggattaggaaagattccgttgagtgga
gccgaaaacccagtgctatcggtgctatcgttcttggtcggattagtcgagcccgaactg
gtggcagagatggcggggaagtcggtagataagatcaaacaagatctgcgatcgcaagtc
ttggcgatccaagaggacagtgcacgtaaatcgagcgaatcacagaagatggcgggtgaa
gagacaggtgtcgggtcggatctgaggatggatgttggtgaaacgaaagccaatccgatt
gaagaatcgacccatcaaaatcaatccatggagatcgacgaagcgagtccggctgagcaa
gcacccaaacggacggcggtagacattgcggcagcagcgatagcatcggcatcagccaaa
gctctcgtcctaggatcggaggatgaggtggagctgggcaagttgatggagacggtgacg
gagcagacgatcaagaagctcgagctgaagcttaaacagttcgaacggctcgagtcggcc
gttgaggtcgaacgtcggaacctcgaacagtggcgccaaaacttgagcatcgaacgccag
gccgtcgtcaaggagattgccgaattcaagaagatgaaggccggagctgagaataatttg
gaggccgctctcgatcaacgcaacggtttgatgggccttccgatccaagctgtacccgtc
cctcctaacgaaactaatggggaacttggattcggagaaccgggtcagggaactctaaat
atgagatga
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