Puccinia triticina (wheat leaf rust): PtA15_18A276
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Entry
PtA15_18A276 CDS
T09180
Name
(RefSeq) uncharacterized protein
KO
K03267
peptide chain release factor subunit 3
Organism
ptrc
Puccinia triticina (wheat leaf rust)
Pathway
ptrc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ptrc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
PtA15_18A276
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptrc03019
]
PtA15_18A276
03012 Translation factors [BR:
ptrc03012
]
PtA15_18A276
Messenger RNA biogenesis [BR:
ptrc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
PtA15_18A276
Translation factors [BR:
ptrc03012
]
Eukaryotic type
Release factors
PtA15_18A276
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
Motif
Other DBs
NCBI-GeneID:
77805694
NCBI-ProteinID:
XP_053028773
UniProt:
A0ABY7D6D5
LinkDB
All DBs
Position
18A:complement(join(2188741..2188864,2188947..2189224,2189305..2189415,2189494..2189668,2189749..2190910,2191088..2191192,2191253..2191316))
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AA seq
672 aa
AA seq
DB search
MNPNANSFQGFRPGANSFVPGAQDGSQPPYPGYYPGQGGYGNAHPNYQQQGAPQNYEAPS
RPPTQQPPSEPTATVNNNGAKTLSISATTRLKQMNANSDKPAVVSLSIGKKKDPAPGPAS
KPSTDPKLSSAARSQSSPQAKKVITIGSSTKSQAPTPPTQSGTPEPPPVDPAPASTPAVE
ATLDAATKTLTIGDARRPVLDADAIKKEVESAVDEETLRDLYESKKDDVKEEGKPHANLV
FIGHVDAGKSTMGGNILYLTGMVDKRTMEKLEKEAKDAGKESWYLSWALDSTIQERAQGK
TVETGRAYFETDIRRYTILDAPGHKTYVPAMISGASQADIAILVISARKGEFETGFERGG
QTREHAMLVKTTGVPKLVVVINKMDDITVEWDQARYDEIVNKLTPFLRLSGFNPAKDLTF
IPVSGYTGANIKDRLAKDKCSWYDGPSLLELLDNMKLTDRKYNAPLMMPISEKYKDMGAV
VVGKLESGKVTKGESVLMMPNKTPAEVSAIYNEMEDEIPRALCGDNVRIRLKGIEDEDIM
CGFVLTDAHKPIHTVTRFEAQLAIIDSKNIICAGYGAVMHVHTLAEECTLSALLHYYDKK
TGKKSRRPPQFAKKGMKVVALLETAAPICVETFKDHPQLGRFTLRDEGKTIAIGKITKLL
ESANPDEPSTKA
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgaacccgaacgccaattccttccagggcttccgacctggtgccaatagctttgttcca
ggagctcaggacggaagtcaacctccctaccccggttactaccctggacaggggggctac
ggcaatgctcatccgaactaccaacagcaaggagcacctcaaaactatgaagccccctct
cgtccgcctactcaacaacctccctccgaacccactgcaacggtgaacaataatggtgct
aaaaccttgtcgatctcagctacaacccgactcaagcaaatgaacgccaactcggacaag
ccggcagtcgtttcactgagcattgggaagaagaaggaccccgcccccggccctgcttcc
aagccttcgaccgatcccaaactatcatcagccgcccggtcccagagctcaccgcaggcc
aaaaaagtcatcaccatcggcagttcaaccaagtcccaagctcctacgcctcccacccag
agtggaactcctgaacctcctccagtcgatccagctcccgctagcacacctgcagtcgaa
gcgaccttggatgcagccaccaagacgttgacgatcggagacgcccgtagaccagttctc
gatgccgatgcgatcaagaaagaggtcgaatcagcagtcgatgaagagacactgcgagac
ttgtatgaatcaaagaaggatgacgtcaaagaggagggcaagccgcatgcgaaccttgtt
tttatcggacacgtcgatgcgggcaagtcgacgatgggcggaaacatcctctatctcacg
gggatggtcgacaagcggacgatggagaagctagagaaggaagccaaggatgctggcaag
gagtcgtggtacctcagttgggcattagattcgaccatccaagaacgtgcccaaggaaag
accgtcgagaccggccgagcatacttcgagacagacatccgaagatacaccatcctggat
gccccaggccacaagacgtacgttcctgcgatgatctccggcgccagtcaggccgacatc
gccatcctcgtcatctcggctcgtaagggcgaattcgaaaccggcttcgaacgaggcgga
cagaccagagagcatgctatgttggtcaaaacaaccggggttcccaagctggtggtcgtg
atcaacaagatggacgacatcaccgtcgaatgggaccaggcaagatacgacgagatcgtc
aataagctgaccccgttcctcagactctccggcttcaatccggccaaagacctcactttt
atccctgtttctggttacacgggtgcgaacatcaaggatagacttgcgaaggacaagtgt
tcgtggtatgatggaccatctctcctcgagctgctagacaacatgaagttgactgaccgc
aagtataacgcccccttgatgatgccgatttcggagaaatacaaggacatgggcgcagta
gtcgtaggcaagttagaatctggcaaagtaaccaaaggagaatctgtcctcatgatgccc
aacaagacacccgccgaagtatctgctatctataatgagatggaagacgagattcctcgg
gcgctctgtggtgacaatgttcggattagactgaaaggcatcgaggatgaagacattatg
tgcggcttcgtgctgacggatgcccacaagccgatccacacggtaacccggttcgaagcc
caactagcgatcatcgactccaagaatatcatctgtgccggctacggcgccgtcatgcat
gtccacaccttggccgaggaatgcacgctctccgccctcctccactactacgacaagaaa
accggtaagaaatctaggagacctccccagttcgctaagaagggcatgaaagtcgtcgca
ctcttggagaccgccgctcccatttgcgtggaaacattcaaagaccatcctcaactgggc
cgattcactttgcgagatgaaggcaagacgattgcgattggcaagatcaccaagctgttg
gaaagcgccaaccccgacgagccttcaaccaaagcttaa
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