Puccinia triticina (wheat leaf rust): PtA15_1A1008
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Entry
PtA15_1A1008 CDS
T09180
Name
(RefSeq) uncharacterized protein
KO
K12849
pre-mRNA-splicing factor 38A
Organism
ptrc
Puccinia triticina (wheat leaf rust)
Pathway
ptrc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ptrc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PtA15_1A1008
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ptrc03041
]
PtA15_1A1008
Spliceosome [BR:
ptrc03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
PtA15_1A1008
Complex C
U4/U6.U5 tri-SnRNP related factors
PtA15_1A1008
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
Motif
Other DBs
NCBI-GeneID:
77805964
NCBI-ProteinID:
XP_053017221
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All DBs
Position
1A:join(8997990..8997992,8998069..8998358,8998447..8998711,8998808..8998969)
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AA seq
239 aa
AA seq
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MANTTAKGALSIHGTNPQFLIDKVLRSRIYEAEYWKESCFGLTAETIIDKTVFDLKYLGS
TITANLRPTEFICLLLKLLQLQPEKEIILEYLRAEEFKYLRALAAFYVRLTFTPINVYQT
LEPLLQDYRKLRTRNLDGPYGLMTFDELIDNLLTESIVFEIVLPRLTSRKVLEELESLPS
RKSSLASHSDSSEAFVSRSPTPAEQDKPGDRSPSRASDTTDRFVSRSPTPLDQDNLEQP
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacacgacggccaaaggggcactttcgatccatggaaccaatccacaattcttg
attgacaaagtcttgaggtcccggatctatgaggctgagtactggaaagaatcttgcttc
ggactgacagccgagacgatcatcgataaaaccgtcttcgacctcaaataccttggttcg
actattacggctaacctcagaccaaccgaattcatatgtctcttactgaaactgttacaa
cttcaacccgaaaaagaaatcattttggaatacctacgcgccgaagaattcaaatactta
agagcattagcagcattttatgtcagactgacatttacccccatcaatgtatatcaaaca
ctagaacctctgctacaagattatcgcaagctgagaacacgaaatttggatggaccgtat
gggctgatgacatttgatgaactgatcgacaacctgctgaccgagtcgatcgtcttcgaa
atcgtcttaccgagactaacatccaggaaggttcttgaggagcttgaatctctaccgtct
cggaaatccagtctggccagccacagtgattccagcgaagcctttgtctcccgttccccc
acgccagctgaacaggataagcctggtgatcggagtcccagtcgggctagtgataccacc
gaccgatttgtctctcgctcgcccacaccactcgaccaagataaccttgaacagccctag
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