KEGG   Puccinia triticina (wheat leaf rust): PtA15_1A276
Entry
PtA15_1A276       CDS       T09180                                 
Name
(RefSeq) uncharacterized protein
  KO
K10752  histone-binding protein RBBP4
Organism
ptrc  Puccinia triticina (wheat leaf rust)
Pathway
ptrc03082  ATP-dependent chromatin remodeling
ptrc03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:ptrc00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    PtA15_1A276
   03083 Polycomb repressive complex
    PtA15_1A276
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ptrc03036]
    PtA15_1A276
Chromosome and associated proteins [BR:ptrc03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     PtA15_1A276
  Histone modification proteins
   HAT complexes
    HATB complex
     PtA15_1A276
   HDAC complexes
    Sin3A-HDAC complex
     PtA15_1A276
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     PtA15_1A276
    PRC2.2
     PtA15_1A276
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     PtA15_1A276
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    PtA15_1A276
  Chromatin remodeling factors
   NuRD complex
    PtA15_1A276
   NuRF complex
    PtA15_1A276
   NuRF complex (fruit fly)
    PtA15_1A276
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz WD40_Prp19 Beta-prop_EIPR1 Beta-prop_TEP1_2nd Beta-prop_RIG_2nd Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 WD40_WDHD1_1st WDR55 WD_LRWD1 EIF3I Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st WD40_RFWD3 Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st Beta-prop_WDR19_1st eIF2A Beta-prop_NUP159_NUP214 Beta-prop_SPT8 ANAPC4_WD40 Beta-prop_SCAP Beta-prop_HPS5 DUF4394
Other DBs
NCBI-GeneID: 77806181
NCBI-ProteinID: XP_053016493
LinkDB
Position
1A:complement(join(2133837..2133981,2134067..2134435,2134498..2134565,2134655..2134733,2134801..2134875,2134964..2135100))
AA seq 290 aa
MTKILNNRKTVTGDVYVFDRTKHPSDPPKDNVCKPDITLRGHSKEGFGLDWNPTKSGEVL
SASEDETICHWDINAYTKGNPVMEPYRVYKGHSSIVSDVSWHSSQGHLFASVSDDKQLLI
WDTRNPDTTKAAQVVTEAHNGEINTVAFSPQSEFLLVTGGADQNINLWDNRNLSNKLHCL
QSHQDELISLAWSPFHPTVFCSGSSDRRINIWDLSKIGEEQTPDDAEDGPPELLFVHGGH
TARPTDVSWSPTTPWHLVSAAEDNVIQLWSPNSTITKGPNGISIPLDELE
NT seq 873 nt   +upstreamnt  +downstreamnt
atgactaagatcctcaacaatagaaaaaccgtcacaggcgacgtttacgttttcgatcgg
accaagcacccatctgatcccccgaaagataatgtttgcaagcctgacattaccctgaga
ggacattctaaggaaggctttggacttgactggaatccaaccaagtccggtgaagtttta
agtgcatcggaagacgagacgatctgccactgggacataaatgcttatacgaaaggaaat
ccggtcatggagccgtatcgtgtctacaagggacatagctctatagtttcagatgtttcg
tggcattcatctcagggccacttgtttgcctcagtcagtgatgataagcaattgctcata
tgggataccaggaacccggacacaacgaaggctgctcaagtagtcactgaggcgcacaac
ggcgagataaatacagtggcattttcgccgcagtcagaatttctgcttgtgactggcggc
gctgaccagaacatcaatctttgggataatcgaaacttatcgaacaagctccactgtctc
caatctcaccaagatgaactcatctccctcgcatggtccccttttcacccgactgtgttt
tgctcaggctcatctgatcgcaggatcaatatatgggacctaagtaaaatcggcgaggaa
cagactcctgatgatgccgaggatggcccacccgaacttctatttgtccatggtggacat
accgctagaccaacagatgtcagttggagccccactaccccctggcatctcgtcagtgca
gccgaagacaatgtgatacagctctggtcgcctaattcaaccattaccaaaggcccgaac
ggcattagcatacctcttgacgaactggaataa

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