Puccinia triticina (wheat leaf rust): PtA15_1A579
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Entry
PtA15_1A579 CDS
T09180
Name
(RefSeq) uncharacterized protein
KO
K08775
breast cancer 2 susceptibility protein
Organism
ptrc
Puccinia triticina (wheat leaf rust)
Pathway
ptrc03440
Homologous recombination
ptrc03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ptrc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PtA15_1A579
03460 Fanconi anemia pathway
PtA15_1A579
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ptrc04121
]
PtA15_1A579
03036 Chromosome and associated proteins [BR:
ptrc03036
]
PtA15_1A579
03400 DNA repair and recombination proteins [BR:
ptrc03400
]
PtA15_1A579
Ubiquitin system [BR:
ptrc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
PtA15_1A579
Chromosome and associated proteins [BR:
ptrc03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
PtA15_1A579
DNA repair and recombination proteins [BR:
ptrc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
PtA15_1A579
FA (Fanconi anemia) pathway
Downstream FA components
PtA15_1A579
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA-2_OB1
BRCA-2_helical
BRCA2
Neugrin
Motif
Other DBs
NCBI-GeneID:
77806515
NCBI-ProteinID:
XP_053016794
LinkDB
All DBs
Position
1A:join(5209422..5209616,5209738..5210526,5210606..5210798,5210868..5211867,5211988..5212245,5212336..5212957,5213041..5213227,5213319..5213476,5213559..5213738,5213820..5213957)
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AA seq
1239 aa
AA seq
DB search
MTTNHHQPSNGRWQQQQHPPATATATATPATEDQRSGPGSAPQKQNNPAHELLTIRNRNW
DKSQKDRAHRGSEAKDPQPASPSTTIPPPLAPQTPSDRQDSLTPLSEPRSEEENYPLTAE
VSENDPEISQYDIWSDCEQEDFDQSELPHNGLLPTASQLTSATAVQEQQQLTASTPHQPK
PPDPPNEPDHAPSQSRKSQLSPDHRQSSAHFIIPRRSISSPLRPPSNPNPAPKTKRTVSS
LFTTGTGEPFPMAIHPPSSGSPTFQPAILYPPPTATSAQKSTPEERQTRPMDDDALPYLP
AAKPRRALSSLFQTGAGQPFPMDEPAEETSSSSAAQTQDCPVFGFQTARGTPVAPPSKDA
MRKALDICAHPALSPFPKPHYTEPDSPSPSHRAKIQKASQLSCSSSVSPSSRANGANKSP
TEDSRPIVRAPTPSSSSMPPPPTKLDSSKPSVGGLFSTASGTPIHIPISAIERARAHLDN
PSQSSDSRPPPTNRAGSPLKDVSNLRPAPHSHHRLSATTDLLTGVGTRPSGHPSLSAKLH
ESLSAVVPKIPSQPTTAATLMSTPVRTLSSGMTVRSALQDSPNEPPSLPHTTTTAPVRRI
SNRIHIGLTPQATSRRASREGKAQEPRSFVTPFKKKLEPMPGQPVSLCTPARTAFYPAQE
TPSADPSRRSVMYIDPVTPFGRQGSSGGKPQSVFDLSTRSRQKIPMAQWLASPKGYSARH
LLSLAVPESVVYMTAKSAAIWTFNAFTEPFGALQALGELLHAGCSISRCSPKWVANHWAL
IVWKLAAFVRWQPDCLSRVWKPSNAVQQLKYRYEREFVRGDRPVLKRILENDCPPSMPMC
LVIVGIVRRSSPSSSSAIQGGPTVPEILELSDGWYRIKAHLDPVLLRVLRRGGLRVGFKL
AISGATTEAPPPVATTALNKTPGEKKKRAPVKETEDEGEDEACLYLEGNATARARWHEPL
GLRPRPWIAALRSLSHDGGRIPLLDIVIVKLFPPMFVDQEGRMGRWGIAEENMLQLAWEK
EREKEADNVAQEQEKELEKIQLVADLVATVHAAKSDGKRRSSGGDKSAEEERSSLEDAAF
DADDLCEELLEDEVSSDALTHLSGAQLVQLRESAQRRYDAFRSTAADEGRKMLDMRVPPR
RTRHVQQLSVIDFHASNAASRTTMTMAGRLVGQISVQDLSLLPEQFLKEGCRYWVENLQP
SRSARWDVCARTKTARPELREINLSTRRDTRWTSIALDA
NT seq
3720 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccaaccaccaccagccgagcaacgggcgatggcagcagcagcagcacccacca
gcaacagcaacagcaacagcaacaccagcgacggaagaccagcgaagcggaccaggttca
gcaccccagaagcagaacaacccggcccacgagctgctgaccatccgcaacagaaactgg
gacaagagccagaaggaccgagcacaccgaggatcggaagccaaagaccctcagccggcg
tctccttccacgacgatccctccgccgctcgcacctcaaaccccatcagaccgacaagac
agtctgaccccgttgagcgagccacgctccgaggaggaaaactatccgctgaccgccgag
gtgtccgagaacgaccctgagatcagccagtacgatatctggagcgattgcgagcaggag
gacttcgaccaatccgagcttccccacaatggactcctgcctaccgccagccagctcacg
tcagcaacagccgtgcaggagcagcaacagcttaccgcatccacaccccatcaacccaag
ccgccggacccgccaaatgaacccgaccacgcacccagccagtcgaggaagagtcaacta
tccccagaccaccgccaaagctcggcccattttattatcccaagaagatcgatctccagc
cctctccgtcccccctccaatccgaacccggcgcccaagaccaaaagaaccgtgtcctcc
ctcttcacaaccggcaccggcgagccgttcccgatggccatccacccgccgtcatccggc
tcgcccaccttccaacccgccattctgtatccgcccccgaccgccacttcggcacaaaaa
agcacgcccgaagagcgccagacccggccgatggacgacgacgctcttccctatctgccg
gccgcgaaaccgcgccgcgcgttgtcctcgctcttccagaccggcgctgggcagccgttt
cccatggatgagcccgccgaagagacatcctcctcgtcggcggcgcagacccaagattgc
cccgtcttcgggttccaaaccgcacgcggaaccccggttgccccaccctccaaggacgcg
atgaggaaggcgctcgacatctgcgctcatcccgcgctttctcccttccctaagccgcat
tacactgagcccgactcgcctagtccttcacatcgagctaagatccagaaagcttcacag
ctgtcgtgttcttctagcgtttctcctagtagcagggccaatggcgccaacaaatctcca
accgaagacagccgcccgatcgtccgagcgcccactccgagcagctcttcaatgccgccg
ccgcccaccaagctagactcgtcgaagccatcagtgggcggcctattcagcacggcatct
ggcacccctatccatatccctatcagcgcaatcgagcgcgcccgcgcgcatctggacaac
ccctctcaatcgtcagactcgcgcccaccccccacgaaccgcgctggatctccgctgaaa
gatgtatcgaatctgcggcccgctccacacagccatcatcggctctctgccacgacggac
ctcttgacaggcgtgggaactcgcccgtctggtcatccctccctctcagccaagctacac
gagtctctcagcgcggtggttcccaagattccctcccagccgactaccgccgccacgctg
atgtccacgcccgtccgcacactctccagcgggatgaccgtccggtccgccctccaagac
tcccccaatgagccgccctcgctcccccatactaccaccaccgcccccgtcagacggatc
tcaaatcggatccatatcgggctcaccccgcaggccacttccagacgcgcctctcgcgag
ggaaaagcccaggaaccccgctcattcgtcaccccgttcaagaagaagctcgagcccatg
ccgggccagcccgtctcgctgtgcacgcctgcgcgcaccgctttttatccggcgcaagaa
acgccctcggcagacccctctcggcgctcggtcatgtacatcgacccggtcactcccttc
ggcagacagggctcatcgggaggaaagccccagagtgtcttcgacctgtcaacaaggtcg
cgccagaaaatcccaatggcacagtggctcgcatcacctaagggatattcggcgcgccat
ctgctgtcacttgcagtgccagagtcggtggtctacatgacggcgaagtcggcggcaatc
tggaccttcaatgcgttcaccgagcccttcggggctctccaggcgctcggcgagctgctc
cacgccggctgctcgatctcccgttgctcgcctaaatgggtggctaatcattgggcattg
atcgtctggaaactcgccgcgttcgtccgctggcagcccgactgtctatcccgggtttgg
aagccctcgaatgccgtccaacagctgaaataccggtatgagcgcgagtttgtgcgtggt
gaccgtccagttctgaagcgaatcctggagaatgactgtccccccagcatgccgatgtgt
cttgtcatcgtaggaatcgtccgtcggtccagcccatcctcatcatcggccatccagggc
ggcccgacggttccagagatcctcgagctcagcgacggctggtaccgcatcaaggcccat
ctggacccggtcttgttgcgcgtgttgagaagggggggtctgcgggtggggttcaagctg
gcgatcagcggggccacgaccgaggctccacctccggtggcgacgacggctctgaacaag
accccgggggagaagaagaagcgggcgccggtgaaggagacagaggatgaaggagaagac
gaggcgtgcttgtatctcgagggaaacgcgaccgcccgggcccgctggcatgagcctctc
gggctccgcccccgcccctggatcgccgccctccgctccctctcccacgacggcggaagg
atcccgctcctcgacatcgtcatcgtcaagctcttcccgcctatgttcgtcgaccaggag
ggtcgcatggggcggtgggggatcgccgaggagaacatgctccagctggcctgggagaaa
gagcgggagaaagaggccgacaacgtcgcacaggagcaggaaaaggagctcgagaagatc
cagctcgtcgccgacctcgtcgctactgtccatgccgctaagagcgatggcaaacgacgc
tcgtcgggcggcgacaagagcgcagaagaagaacggtcgtctctcgaggacgctgcgttt
gatgcggatgatttgtgtgaagagttgctcgaggacgaggtgtccagcgacgcactgacg
catctctcgggcgcccaactcgtccagctgcgcgagtcggcgcaaagacgctacgacgcg
ttccggagcaccgcggccgacgagggacgaaagatgctcgacatgcgggtgccgccgagg
aggacgcgccacgtccagcaactctccgtcatcgacttccacgcctccaacgccgcttct
cggacgacgatgacgatggcggggagactggtgggccagatatcggtacaagacttatcg
ctgcttcccgagcagttcttgaaggaaggatgtcgctactgggtcgagaacctccagccg
tcgcgcagcgcccgctgggacgtctgcgctcggacaaagaccgcccggcctgagctgcgc
gagatcaacttgtccacgaggcgcgatacccggtggaccagcatcgccttggacgcttaa
DBGET
integrated database retrieval system
