Puccinia triticina (wheat leaf rust): PtA15_1A954
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Entry
PtA15_1A954 CDS
T09180
Name
(RefSeq) uncharacterized protein
KO
K25178
coiled-coil domain-containing protein 174
Organism
ptrc
Puccinia triticina (wheat leaf rust)
Brite
KEGG Orthology (KO) [BR:
ptrc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptrc03019
]
PtA15_1A954
03041 Spliceosome [BR:
ptrc03041
]
PtA15_1A954
Messenger RNA biogenesis [BR:
ptrc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
PtA15_1A954
Spliceosome [BR:
ptrc03041
]
Complex C
Other components
EJC/TREX
PtA15_1A954
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4078
KdpC
Motif
Other DBs
NCBI-GeneID:
77806930
NCBI-ProteinID:
XP_053017167
LinkDB
All DBs
Position
1A:complement(join(8569562..8569937,8570065..8570445,8570548..8570912))
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AA seq
373 aa
AA seq
DB search
MPNAIDISASSMTGLLGAVEASKTAHSLARKPTGKTTGDGTVEDIYNISRYKKGSAITKN
SSKSKDYFERNSKGSNKGVKSRAMKDKLETRAARISSQPPSVQEQLAMEALQRKSKIYDA
TIRGQKGGLSEKQLEACPLDIDAKRANLNLQADSDTDESVEEVSKPTNIGSSSMPPTSFA
GRLSSAQDLPRSPILGEREPEEEEWIEGKDEFGRDTLIPASKLKTSPLDPQRTLAFAQTE
SASHLQEIGAQYGAQTEFPLLELPEGLQRKRTADEPIEKYFDPKAERRQLGTAFYALSSN
PEERQRQQEELRAREEETKQARTAANKLPEKQLSAAEKALEARKRLLQSKKEELARKRMK
KTDVSSAGPAPSS
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgccgaacgccatcgatatctcagcttcctcgatgaccggcctgttgggcgcagtcgag
gcttcgaaaacagcacattctctggcgcgcaaaccgacaggaaaaacgacgggcgatggt
actgtagaggacatctacaacatttcgcgctacaaaaagggctcggcgatcacaaaaaac
agctccaagtcaaaagattattttgaaaggaactccaagggatcaaataaaggtgtcaag
tcccgggcaatgaaagataaattggaaactcgagctgcgcggatatcatcgcaacctccc
tcggtgcaagaacagctggcaatggaagcactccagcgcaagtcaaaaatatacgatgcc
actatacgaggccagaaaggaggattatctgagaaacagttggaggcctgtccattggat
atcgatgccaagcgagccaatctgaacttgcaggccgactcggacacggacgaaagcgtg
gaggaagtatccaagcctaccaacattggctcctcatcgatgcctcccacgtccttcgca
ggtcggttatcgtctgcacaagacctacctagatcgcccatactgggtgaacgagaaccc
gaggaagaagaatggatcgagggtaaagatgaatttggacgagataccttaattcccgca
tccaaactaaaaacttccccactcgatccccaacgaactctggcgtttgctcagacagaa
agcgccagtcatctgcaagaaatcggagctcaatacggcgcccaaactgaatttccatta
ctcgagctccccgaaggacttcagcgaaaaaggacggcagatgaacctattgagaagtac
tttgatccaaaggctgagcgccgccagctggggacagccttctatgctctctccagcaat
ccggaagagcgtcaacgtcagcaggaggagcttcgtgcccgcgaggaagaaactaagcag
gcccgcaccgcagcaaacaagcttcccgagaaacagttgagcgcggccgaaaaggctctt
gaagctcgtaaacgtctcttacagtctaagaaagaagaacttgctcgtaaacgcatgaag
aaaacggacgtgagctcagctggtccggctccgtcatcgtga
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