Puccinia triticina (wheat leaf rust): PtA15_2A386
Help
Entry
PtA15_2A386 CDS
T09180
Name
(RefSeq) uncharacterized protein
KO
K03124
transcription initiation factor TFIIB
Organism
ptrc
Puccinia triticina (wheat leaf rust)
Pathway
ptrc03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ptrc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
PtA15_2A386
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptrc03021
]
PtA15_2A386
Transcription machinery [BR:
ptrc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
PtA15_2A386
Prokaryotic type
Archaeal type
TFB
PtA15_2A386
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
RB_B
ORC6
Zn_ribbon_RRN7
BAR_3_WASP_bdg
Motif
Other DBs
NCBI-GeneID:
77807297
NCBI-ProteinID:
XP_053017628
LinkDB
All DBs
Position
2A:join(3806936..3807007,3807086..3807187,3807286..3807310,3807421..3807705,3807801..3808269,3808368..3808455)
Genome browser
AA seq
346 aa
AA seq
DB search
MATIAFPSRNPQAPKEAAAFRQDLNVRLICPDCKCARLVEEFSSGDLVCGSCGLVVGDRI
VDTRSEWRTFAGDEGDDPSRVGGPSNPLLNGVETFETVISFKDGNTGVARDLNRAATRAA
AKSGEKSIAAAFVSIQDMCDTISLPRTVTDIAKQLYRRADEEKLLRGKQADAIIAACIFI
ACRQSKVGRSFKEVVALTRVPKKQIGQCFKALSAAFETSAVGGGGALNTATGESSGAGAE
DLMARFCSHLGLPFYVQSGAKRIAILQRDMGILAGRSPISVASACIYFASHLYGCPKSVK
DIAGVAGVSEVTIKIAYKLLHSKSKEIAGTEATTNEAASINRLPKP
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccatcgcattcccctcccgcaatcctcaggctcctaaggaagcagcagccttc
cgacaagatctgaacgttcgtctcatctgccctgattgcaaatgtgcaagattggtcgaa
gagttttcatctggggatcttgtctgtggtagctgtggtttagtcgttggtgatcgtatc
gtcgacactcgctctgaatggcgaacattcgcaggtgacgaaggtgacgacccctctcgt
gtcggtggcccaagcaacccacttttgaacggcgtcgagacctttgaaaccgtcatctcc
ttcaaggatggcaatactggtgtggcccgtgacctcaatcgtgcggctacccgcgctgcg
gccaagagtggagaaaaaagcattgccgccgctttcgtttcgatccaagacatgtgtgac
accatcagtctcccacgaacagtgacagacattgcaaagcaattgtacagaagggcggat
gaagagaaactgctcaggggtaaacaagccgatgcaatcatcgccgcttgcatcttcatc
gcttgtcggcaatcaaaggtcgggagatcgttcaaagaggtcgttgcgcttacccgcgtg
cccaagaagcaaatcggccaatgtttcaaggctctttccgctgcgttcgagacctccgcg
gttggcggtggcggtgccttgaatacagccacaggcgaatccagcggtgcaggagctgaa
gatctcatggctcgtttctgcagtcatcttgggcttccgttctacgttcaaagcggcgcc
aagaggatcgcaatcctgcagcgagacatgggtatccttgctggtcgaagccctatcagc
gtagcaagcgcttgcatttacttcgccagtcatctgtacggctgccccaagagtgtgaag
gatatcgctggtgtcgctggcgtcagcgaagtcacgatcaagatcgcgtacaagctttta
cattccaagtctaaggagattgctggcaccgaagccactaccaatgaagccgcgtcaatc
aatcgactgcctaaaccttga
DBGET
integrated database retrieval system
