Puccinia triticina (wheat leaf rust): PtA15_2A667
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Entry
PtA15_2A667 CDS
T09180
Name
(RefSeq) uncharacterized protein
KO
K12821
pre-mRNA-processing factor 40
Organism
ptrc
Puccinia triticina (wheat leaf rust)
Pathway
ptrc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ptrc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PtA15_2A667
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ptrc03041
]
PtA15_2A667
Spliceosome [BR:
ptrc03041
]
Complex A
U1 snRNP components
U1 related factors
PtA15_2A667
Complex B
PtA15_2A667
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FF
WW
FF_PRPF40A
WW_TCERG1
WW_2
Glyco_hyd_101C
Motif
Other DBs
NCBI-GeneID:
77807605
NCBI-ProteinID:
XP_053017905
LinkDB
All DBs
Position
2A:join(6231432..6231434,6231531..6233102,6233201..6234169,6234243..6234294,6234366..6234406)
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AA seq
878 aa
AA seq
DB search
MASTWTEHRSPTGRLYWFNAQTGTSSWERPEALKTPAERALAATPWKEYQTAEGRKYWHH
TVTKETTWTLPDAVREVIEKAAASAPPPAPPASSQPVSSAPGPPPAPKQPTFVAASTPTP
AATPVTTTVPPTGTTPTTNLPPRPVTSILHSAPVTNHAPVPMPEFKSPEDAERAFIGLLR
LKGVTPSWTWEQTMRDIITEPLYKALDTLAARKAAWEKFIDNERKREKETRAKNIARVRG
SWNAGLDSLGEEKKIVDDQGLEIKLPGASPRLWWTWDRLKQEVEKRAPEVWKLCRDDEER
KVLWEDYLIELRQRDTTAANQLRGRQQDKLTSLLRAHQDKLNLPGELELIQWRVAQEAIL
QSEDFQNDEDLRKMDDLDMLIVFEEEIKRAEKETMELKAKQKDDKRRSCRKARAAYIKLL
DELKLSGQIHADTMWKEIYPILKDDERFLNMLGLTGSSPLELFWDVIDDLQLELEEKQKV
VEDLLEERGKKVNETTQLDEFLTWLPKDMESYKLDPPMLKQVFYMLVDYAVRIAKEDKRR
AEKRLRNQIEDLRYALKKLSPPVQIDTPYEEALERFSHLAEFKALEGQDEGRKEAYNRYM
ERIKEKAAIEDKRSRRKEDESYRYESRKKGSLAQFSDDESVNSASKRRRKDPLDDGKHHR
HQSPRSNRLPDSQSSPKGNGEYRNDRDHSTDRERIRVEERDEGKERETNPTLDPPTADAA
PEGDHDKSSSRDGERRRDTEREKTEDRSRDRTDTRDRPSSRLSADERDRRRKEYDLDRHG
SRRHRSSRRGDRDYDEESKHLGSRYDEDDGHFHDKNSENGLSEKRARSHDRSESRNKNDP
ADQDRDTKRAKTDQPKPEKSAEKSDVMSSPKGTPDRTS
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atggcctcaacctggactgaacatcgctcgccgaccggtcggctgtattggttcaatgcc
caaacaggcacttcatcgtgggaaagaccagaagctctcaaaacaccagctgaacgtgca
ttggcagcgacgccgtggaaggaatatcaaacggctgagggccggaaatattggcaccac
actgtgaccaaagaaaccacctggactttgcctgatgcagtacgtgaggttatcgaaaaa
gctgctgcttccgcacctcctccagcacctccagcgtcttctcagcctgtttcttctgct
cccggtccacccccagctcccaagcaacccacctttgttgcggcttcaacccccacccct
gcggcgacgcccgtcaccaccactgttccgccgactgggactactcctacaaccaacttg
ccacctcgaccagtcacttcaatcctccattcagcacctgtcacaaaccatgcacccgtt
ccaatgcctgaattcaagagccccgaggatgctgaacgtgctttcatcggtcttctgcga
ttgaaaggcgtaaccccttcctggacatgggaacagaccatgcgtgacatcatcaccgaa
ccactttacaaagccctcgacacattggcagccaggaaagccgcctgggagaaatttatc
gataatgagcgtaaacgtgaaaaagaaacccgcgcaaagaatattgctcgggttcgtggt
agctggaatgctggactggatagcctcggcgaagaaaaaaaaattgtagacgaccaaggc
ttggaaatcaaacttcctggagcgtctcctagactctggtggacttgggatcgattaaag
caagaggtcgaaaagcgagcccctgaggtgtggaaattgtgcagagacgacgaagagcgg
aaagtattgtgggaagattacctaatcgaactcagacaacgagacacaaccgccgcgaat
cagcttcgaggaagacagcaggataagctgactagtctgcttagagcgcatcaagacaaa
ctgaatctgcctggcgaacttgaactcatacaatggcgagtggcccaggaagccatctta
caaagcgaggatttccagaatgacgaagatttgcggaagatggatgacttggacatgctt
attgtgttcgaagaagaaatcaaacgtgcagagaaagagacgatggagctgaaggcgaag
cagaaagatgacaagcgcaggtcttgtcgtaaagcgcgtgctgcctatatcaagttgctt
gacgaactcaaactttccgggcagattcacgccgacacaatgtggaaagagatttatccc
attttgaaagatgacgaacgttttctcaacatgctgggattaactggaagctctcctctg
gagctgttttgggacgtcattgatgatctccaactcgaacttgaagaaaagcagaaggtg
gttgaagacttgcttgaagaacggggcaaaaaggtcaacgagactacgcaattagacgaa
ttcctaacttggttgccgaaagatatggagtcttataaactcgatccgccaatgttgaaa
caggtattctacatgcttgtggattatgctgttcgaatagcgaaggaagacaagcggcgt
gcggagaaacgacttcggaatcaaattgaggatctccgctacgccctcaaaaagctctct
ccgcccgttcaaattgatactccttatgaagaagccttagaacgattctcacacttggcc
gagttcaaagcgcttgaaggtcaagatgaaggtcgcaaagaagcctataatcgatatatg
gaaagaatcaaagaaaaggcggccatcgaagataagagaagtcggcgcaaagaggatgag
tcttaccgctacgagtcaaggaaaaaggggtcgcttgcacaattttccgatgatgaaagt
gtcaattctgctagcaaacgcagacgcaaggatcctctcgatgacggcaagcaccatcga
caccaatcacctcgttccaatcgactccctgatagccaatcatctcccaagggcaacggc
gaatatcgcaacgacagagaccacagcacagatcgtgaacgcattcgcgtggaggaacgt
gatgaagggaaagaacgggagaccaatcccaccttggacccacccaccgcggacgcagct
ccagagggtgatcacgataaatctagcagtcgagatggagagcgccgtagagacactgaa
cgggagaaaaccgaagatcgatcaagagatcgaacagacactcgagatcgtccaagcagc
cgactatcagccgatgaacgagaccgccgcaggaaagaatatgatcttgatcgacatggc
tcccgacgacatcgctcatcgcgcaggggagatcgagattatgatgaggaatccaaacat
cttggcagtcgttacgatgaggatgacgggcatttccacgacaagaactcggagaacggc
ttatcagaaaaacgggctagaagccacgaccggtccgaaagtcgcaataagaacgacccc
gcggatcaggatcgtgataccaagcgtgctaagactgaccaacccaaacccgaaaagtcg
gcggaaaaaagcgatgttatgtcctctccaaaaggcacccctgatcgcactagctaa
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