Puccinia triticina (wheat leaf rust): PtA15_2A850
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Entry
PtA15_2A850 CDS
T09180
Name
(RefSeq) uncharacterized protein
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
ptrc
Puccinia triticina (wheat leaf rust)
Pathway
ptrc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ptrc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PtA15_2A850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ptrc03041
]
PtA15_2A850
03009 Ribosome biogenesis [BR:
ptrc03009
]
PtA15_2A850
Enzymes [BR:
ptrc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PtA15_2A850
Spliceosome [BR:
ptrc03041
]
Complex A
U1 snRNP components
U1 related factors
PtA15_2A850
Complex B
PtA15_2A850
Ribosome biogenesis [BR:
ptrc03009
]
Eukaryotic type
Pre-60S particles
Helicases
PtA15_2A850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
DUF2443
Utp25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
77807808
NCBI-ProteinID:
XP_053018088
LinkDB
All DBs
Position
2A:join(7929883..7930297,7930517..7930883,7930949..7931688,7932372..7932438,7932504..7932571,7932654..7932705,7932860..7932965)
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AA seq
604 aa
AA seq
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MYAACGSIKPNVLRPGQEHSAQVGARSAVDQHEPHCGSASAPGLKPSGLCPTNHQIHRIP
LSPHPHSLPPCTHTSQSSHLEVHSIIWDTSFYSSQSYFNMSYGGGYGGGGNSSGYGMHKL
NMIFILTGRLLSLLTHFTGLGSGLGRPKWDNSTLTKFEKNFYVEDSRISARSEREIDQFR
AEKEIQVFGKNIPKPVSNFSEAGFPDYIMSEIRNAGFNAPSPIQCQAWPMALSGRDVVAV
SATGSGKTIAFSIPAMIHINAQPLLAPGDGPIVLILAPTRELAVQIQGECTKFGASSRIR
NTCVYGGVPKGQQIRDLTRGAEIVIATPGRLIDMLESRKTNLHRVTYLVMDEADRMLDMG
FEPQIKKIVEQIRPDRQTLMFSATWPKEVQRLASEYLKDFIQVNVGSLELTANINITQIV
EVCSDFEKRGKLIKHLDKISSESAKVLIFVGTKRVADDLTKYLRQDGWPSLAIHGDKQQQ
ERDWVLEEFKSGRSPIMIATDVASRGLDVKDIAYVINYDMPNGIEDYIHRIGRTGRAGRT
GTAYSYISADQSKLARELVKILKDANQVIPEEGVVDMAAEVPVRTLTAWAAEVAEVAVHG
GNML
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgtacgcagcatgcggaagcatcaaaccaaatgtgttgaggcccggccaagaacattct
gcgcaagttggcgcgcggagtgcggtggaccagcatgagccgcactgcggaagcgcatct
gcacccggtctcaagccctcgggtctctgtcccaccaaccatcaaatccaccgaatcccc
ctttcaccacatccccattcacttcccccctgcacccacaccagccaatcctcacatctc
gaggtccattcaataatctgggacacttcattctactctagtcaatcctacttcaacatg
tcatatggtggcggttacggcggaggcggcaactcaagcggctatggtatgcacaaactc
aacatgatcttcatcctgaccggccgcttactttcactactcacgcacttcacaggcctt
ggcagcggcttgggacgtcccaagtgggataactcgaccttgaccaaattcgaaaaaaac
ttctatgtcgaagactcacggatcagcgctcgttcggagcgtgaaatcgaccaattccgt
gccgaaaaagagattcaggtgttcgggaagaatattcccaagcccgtctcgaatttcagc
gaggcgggtttcccggactacatcatgagcgagattcgcaacgctggattcaatgccccg
agtcccattcaatgccaagcttggcccatggccctcagtggtcgcgatgtggtggccgtt
agtgccaccggatcgggaaaaaccattgccttttctatcccggccatgatccacatcaat
gcccaacccctcctagctccgggcgacggacccatcgttttgatccttgccccaactcgt
gagctggccgtgcaaatccaaggcgaatgcaccaaattcggagcctcgtcccgcatccgg
aacacgtgcgtttacggaggcgttcccaagggccaacaaattcgagacctcactcgcggg
gcagagattgtgatcgccactcccggtcgtctgatcgatatgctcgaaagtcgcaaaaca
aatctgcatcgagtcacgtatcttgtcatggacgaggcagaccgcatgctcgatatgggt
ttcgagcctcagatcaagaagattgtcgagcaaatccgacccgatcgtcaaacgctcatg
ttttcggctacctggcccaaggaggtccagcgattggccagcgaatatctgaaggatttc
atccaggtcaacgttggaagtcttgaactcactgccaacatcaacatcacccaaattgta
gaggtgtgcagtgacttcgagaagagaggcaagctgatcaagcatctcgacaagatctca
tccgaatccgccaaagtacttatctttgtcggaacaaagcgagtggccgacgatctgacc
aaatatctgcgtcaagatggatggccgtcacttgcgattcatggtgacaagcagcagcaa
gaacgtgattgggtgctcgaggagttcaagagtggccgtagtcctatcatgatcgccacc
gatgtcgcctcgcgtggtttagacgtcaaagacatcgcctatgttatcaattatgacatg
cccaacggtattgaagactacatccatcggatcggtcgaaccgggcgtgctggccgaaca
ggcacagcctacagctatattagcgccgatcagagcaagctggcccgagagttggtcaag
atcctcaaagacgccaaccaagttattccggaggagggggtggtagatatggcggcggag
gttccggtgcgaactcttacggcatgggccgcggaggtggcggaggtggcggttcacggt
ggtaatatgctgtga
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