Puccinia triticina (wheat leaf rust): PtA15_2A932
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Entry
PtA15_2A932 CDS
T09180
Name
(RefSeq) uncharacterized protein
KO
K15323
tRNA-splicing endonuclease subunit Sen34 [EC:
4.6.1.16
]
Organism
ptrc
Puccinia triticina (wheat leaf rust)
Brite
KEGG Orthology (KO) [BR:
ptrc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ptrc03016
]
PtA15_2A932
Enzymes [BR:
ptrc01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
PtA15_2A932
Transfer RNA biogenesis [BR:
ptrc03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
PtA15_2A932
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
DUF5401
Motif
Other DBs
NCBI-GeneID:
77807899
NCBI-ProteinID:
XP_053018170
LinkDB
All DBs
Position
2A:join(8824179..8824275,8824358..8824495,8824582..8825127,8825228..8825421)
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AA seq
324 aa
AA seq
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MGPLRRQPPTSPIGPAIPIFVSNGKGYIWAVDQVKRLRIDYQISGLLTGTLPQLAQQNVF
LGLPLQLMPEEVVVLVESGIAVLVDDLNSHRPATLEESEEYQTKRDQEIEEERRLTVIRD
DERRAAAKQVYRSQIEAAEQKRRARQQQAPQTEDRSDHPGEEIQQGMLPPDTSVDDSKST
SNPSRVPYFVPVHLQSRPPTHSPEGSNMFRALDSARQAGLWTYPEDQYQRARCAVFSALW
RQGMFLGIGLKFGCDFLVYPGDSLRFHSHFACTVIQDPQKPIAPLSLVSYGRLATAVKKS
HLLACWDESTQAVKFLSLEWAGMG
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgggcccactgcgaagacaaccgccgacatcgcccatcggcccagccatcccgattttt
gtctcgaatggcaagggatacatctgggcagttgaccaggtcaaacggttgagaattgat
tatcagatctctggtctcctgaccggtacgctgcctcagctggcacagcagaatgtgttt
cttggactaccgttacagctcatgccagaggaagtcgtcgtcctggtcgaatcgggcata
gcggttctagttgatgatctgaattcgcatcgcccagcgacgctcgaagaatctgaagaa
taccagaccaaacgggatcaagagatcgaagaggagcgacgtttgacggtaatccgggat
gacgagcgacgagcggctgccaagcaagtctaccgatctcagattgaagctgcagagcag
aaacgacgcgcccgacaacagcaggcgccgcagacagaggatcgctctgaccatccagga
gaagagatccagcaaggaatgctgccaccggacaccagtgttgacgacagcaaatcgacc
agcaacccctcccgagtcccctacttcgtccccgtccatctccaatctcggccgcctacg
cactcccccgaaggctcgaacatgttccgtgcattggattcggcgagacaggcgggcctc
tggacttaccctgaagatcaatatcaacgggctagatgtgccgtcttttctgcgctttgg
aggcaaggaatgttcttgggtattggtctcaaattcggatgcgactttctcgtgtatccg
ggcgactcattgcgattccattctcacttcgcttgcacagtgattcaggacccccaaaag
cccatcgcacctttatcgcttgtctcctacggaagattagccacagccgtcaaaaagtct
catctactagcatgttgggacgagagcacccaagccgtgaagttcttgagtctcgagtgg
gctgggatgggctga
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